| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2327 |
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| Symbol | |
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| ID | 3683597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2888265 |
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| End bp | 2889692 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637717672 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_322840 |
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| Protein GI | 75908544 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | [TIGR00947] probable bicarbonate transporter, IctB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTAG TCTGGCAACG ATTTACTTTA TCTTCTTTAC CTGTAAAACA GTTTCTAGCT
ACAAGTTACT TACATCGGTT CCTGGTGGGA CAGTTGTCTT CTTGGCGGCA AACTAGTTTC
TTACTTCAGT GGGGAGACAT TATTGCAGCT GCGTTACTCA GCTTGATATA TGTTTTGGCT
CCTTTTGTCT CTAGCACTCT CGTTGGTGTG CTGCTGATAG CTTGCGTAGG TTTTTGGTTG
TTGTTGACTT TATCTGATGA ACCCTCATCA AGCAATAACT TCCTTGTGAC TCCTATACAT
TTGTTGGTGT TGCTCTATTG GGGAATTGCT GCTGTTGCAA CGGCATTATC ACCAGTCAAG
AAGGCAGCAT TAACTGACTT GTTAACCTTG ACTTTGTATT TGTTATTATT TGCTCTTTGC
GCCAGGGTAC TGAGATCGCC GCGCCTGAGG TCTTGGATCA TTACCCTCTA CCTATCTGCA
TCACTGGTTG TCAGTATATA TGGAATGCGA CAATGGCGTT TTGGTGCGCC CCCACTGGCG
ACTTGGGTTG ATCCAGAGTC CACCTTGTCT AAAACTACAA GAGTTTACAG TTATTTAGGC
AATCCCAATT TGTTGGCTGG TTATTTAGTA CCTGCGGTGA TTTTTAGCCT CATGGCAGTT
TTTGTCTGGC AAGGCTGGGC AAGAAAATCT TTAGCCGTCA CAATGCTGTG TGTAAATACT
GCTTGCTTAA TTTTTACTTA TAGTCGTGGC GGCTGGATTG GTCTTTTGGT AGCAGTTTTA
GTGGCGACGG CATTGCTAGT TTATTGGTGG AGCGTGCAAA TGCCGCCTTT TTGGCGAACT
TGGTCATTAC CCATACTTTT GGGTGGTTTA ATAGGGGTAT TGTTGATTGC GGTGTTATTT
GTCGAGCCAG TGCGGTTTCG GGTTCTCAGC ATTTTTGCCG ATCGCCAAGA TAGCAGCAAT
AATTTCCGGC GCAATGTATG GGATGCTGTT TTTGAGATGA TCCGCGATCG CCCAATTATC
GGTATTGGCC CTGGTCATAA TTCTTTTAAT AAAATCTACC CTCTTTACCA AAGACCTCGT
TATAGTGCTT TGAGCGCCTA TTCCATTTTC CTAGAAGTGG CTGTGGAAAT GGGTTTTGTT
GGTCTAGCTT GCTTTTTCTG GTTAATTATC GTCACTATTA ATACAGCATT CGTTCAGCTG
CGCCGTCTGC GTCAATCTGC CAATGTGCAA GGATTTTGGT TAATGGGTGC CTTAGCCACG
TTGCTGGGAA TGCTGGCTCA CGGCACGGTA GACACTATAT GGTTCCGTCC AGAAGTTAAT
ACTCTCTGGT GGTTAATGGT TGCTCTCATT GCCAGCTATT GGACACCTTT AGCCGCAAAC
CAAAGTCAAG AACTGAATTT ATTTAACGAA GAACCCGCAA GCAACTAA
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| Protein sequence | MNLVWQRFTL SSLPVKQFLA TSYLHRFLVG QLSSWRQTSF LLQWGDIIAA ALLSLIYVLA
PFVSSTLVGV LLIACVGFWL LLTLSDEPSS SNNFLVTPIH LLVLLYWGIA AVATALSPVK
KAALTDLLTL TLYLLLFALC ARVLRSPRLR SWIITLYLSA SLVVSIYGMR QWRFGAPPLA
TWVDPESTLS KTTRVYSYLG NPNLLAGYLV PAVIFSLMAV FVWQGWARKS LAVTMLCVNT
ACLIFTYSRG GWIGLLVAVL VATALLVYWW SVQMPPFWRT WSLPILLGGL IGVLLIAVLF
VEPVRFRVLS IFADRQDSSN NFRRNVWDAV FEMIRDRPII GIGPGHNSFN KIYPLYQRPR
YSALSAYSIF LEVAVEMGFV GLACFFWLII VTINTAFVQL RRLRQSANVQ GFWLMGALAT
LLGMLAHGTV DTIWFRPEVN TLWWLMVALI ASYWTPLAAN QSQELNLFNE EPASN
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