Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2252 |
Symbol | |
ID | 3679326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2802629 |
End bp | 2804197 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637717594 |
Product | alkaline phosphatase |
Protein accession | YP_322765 |
Protein GI | 75908469 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00266455 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATTAA TAAATCGCAA CTTCCTTGCA ACCCATTGCA AACGCAGGAA TTTTTTACTG GGTGCAGGAC TAATCACAGG GTTAGTAGTA GCCAGTCAAT GGCATCCTGT GATGGCGCAA ACAAGATTTT CTGGCTATCC ATTTAGTCTA GGTGTTGCCT CTGGAGATTC CTTACCTGAT AGCGTGGTGT TATGGACAAG ACTAGCACCA GATCCAGTCA ACGGCGGTGG TATGTCACCA GTGAATGTTC CTGTGCAGTG GCAAATCGCA CGGGATGAAA ATATGACACA GGTTGTACAA AAAGGAACAG TCTTAGCAAC ACCCGAACTA GCTCACTCAG TACACGTTGA TGTCCGTGGG CTAGAGCCTG ATCGTTGGTA CTGGTATCAA TTCAAAGTAG GTAATGAAGT CAGCCCCAAA GGACGTACAC GTACAGCCGC ATCACCTCAT AGCTCTATTC AAAAATTTAA TTTCGCCTTT GCTTCTTGCC AAGATTGGCA GAATGGCTTT TACACAGCCT ACAAACACAT GGCTGAAGAA GACCTTGACT TAGTTGTGCA TCTAGGTGAC TACATCTATG AGTATGGGCC TCGCTCTGGT GCGCCACGTC AGCATATCGG CCCAGAAATC GTTACTCTTA GCGATTACCG AAACCGCTAT GCTTTGTATA GAACTGACGT AAATTTACAA GCAGCTCATG CTAACTTCCC TTGGATTTTT ACTTGGGATG ACCATGAAGT AGATAACAAC TATGCCAACT TCATTCCCGA AGATAACCAG AGTCGGCAAG CATTTGAGCG CCGACGAGCC AATGCTTACC AAGCTTACTA TGAGCATATG CCATTGCGCC TATCCTCCTT GCCCAAGCAA TCTAGTATGC TGCTATATCG ACGGTTAACT TTTGGGGATT TAGCTGAGTT CAATGTCTTA GATACTCGCC AATACCGGAC TGACCAACCT TGTAATGATG GACTCAAGCC ACTGTGTAAC GCAGCTTTAG ACGCAGCCGC CACCATGACA GGTGCAAGAC AAGAAGGTTG GTTACTCAGA GGACTAGACA AATCAAAAGC ACGCTGGAAT ATAATTGCTC AACAAACAAT GCTTGGTCAA TTTGATTTTG ATGCTCGTCC CGATTCCCAA GTCTTCAACG TTGACCAATG GGATGGTTAT GTCGCGGCTC GTAATCGCCT CTTGAGTTTT TTCGCACAGC GTAGACCCTC AAACCCAGTA GTAATTACTG GAGATATCCA TTCCAGTTGG GTACATGATT TAAAAGCTGA CTTTAATAAT CCACTGTCAG CAACCGTAGG GACTGAGTTT GTGGGTACTT CCATTACTTC TAGCTTTCCT ACAAATTCCA TTGCACCAGT TAGAGCAGCT TTGAGCAACA ACCCCCATAC AAAATTCTTC GATGGTGCTT ATCGCGGTTA TGTTCGTTGC CAACTAACTA GAGAACGTTG GCAAACTGAT TACCGTGTGG TGTCCAGCAT CCTTGAAGAG AATGCTTCTA TTAGCACCCT CGCTTCCTTT GTGGTAGAAA ACGGGCAGCC AGGTGCAAAA ACAGCGTGA
|
Protein sequence | MELINRNFLA THCKRRNFLL GAGLITGLVV ASQWHPVMAQ TRFSGYPFSL GVASGDSLPD SVVLWTRLAP DPVNGGGMSP VNVPVQWQIA RDENMTQVVQ KGTVLATPEL AHSVHVDVRG LEPDRWYWYQ FKVGNEVSPK GRTRTAASPH SSIQKFNFAF ASCQDWQNGF YTAYKHMAEE DLDLVVHLGD YIYEYGPRSG APRQHIGPEI VTLSDYRNRY ALYRTDVNLQ AAHANFPWIF TWDDHEVDNN YANFIPEDNQ SRQAFERRRA NAYQAYYEHM PLRLSSLPKQ SSMLLYRRLT FGDLAEFNVL DTRQYRTDQP CNDGLKPLCN AALDAAATMT GARQEGWLLR GLDKSKARWN IIAQQTMLGQ FDFDARPDSQ VFNVDQWDGY VAARNRLLSF FAQRRPSNPV VITGDIHSSW VHDLKADFNN PLSATVGTEF VGTSITSSFP TNSIAPVRAA LSNNPHTKFF DGAYRGYVRC QLTRERWQTD YRVVSSILEE NASISTLASF VVENGQPGAK TA
|
| |