Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2234 |
Symbol | |
ID | 3679483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2775932 |
End bp | 2777869 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637717576 |
Product | FtsH-2 peptidase |
Protein accession | YP_322747 |
Protein GI | 75908451 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0163354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTTG AAACTGATAA AAAAAATTCA ATTAAACCAC CAAGGTTACG ACAATTTGGC GGCAGTTTCC TGATTCTGCT AACTTTGCTG TTATTGCTTA ACTTTATTGT TCCCAGTTTT TCTGGCCCTC GCTTGCCACA GGTTCCTTAT AGTGACTTTA TCGCTCAAGT ACAAGCAGGT AAAGTAGATA AGGCGATTGT AGGGGGCGAT CGCATTCAAT ACTCCATCAA AACTCAAACC CCCGACGGTA AAGTCGTAGA CCAGGTATTT GCTACCACGC CGGTCGCTAT TGATTTAGAC TTACCCAAAA TTCTCCGCGA AAATAATGTT GAGTTTGCCG CACCACCACC AGACCAGAAC GGCTGGATTG GAACGCTACT AAGTTGGGTA GCACCACCAT TAATTTTCTT TGGGATTTGG GCATTTTTAA TTAATCGTCA AGGTGGTGGC CCAGCTGCAT TGACAGTCGG GAAAAGTAAA GCCCGGATTT ACTCAGAAGG TAGCACTGGG GTGAAATTTC TCGATGTGGC TGGGGTGGAT GAAGCCAAGG CGGAATTAGA AGAAATTGTT GACTTCTTGA AAAATGCCAC TAAGTACACA AATTTAGGTG CGAAAATTCC TAAGGGTGTG TTGTTAGTCG GCCCTCCTGG GACTGGTAAA ACTTTACTAG CAAAGGCGAT CGCTGGTGAA GCGGGTGTAC CATTCTTCAG TATCTCTGGT TCAGAATTTA TTGAGTTGTT TGTCGGTGTC GGTGCGGCGC GCGTCCGTGA CTTATTTGAG CAAGCCAAAA AACAAGCTCC CTGTATCGTC TTCATCGATG AGTTAGACGC ATTAGGTAAA TCTCGCGGTG GTGCTGGCGG CTTTGTTGGC GGTAACGACG AACGCGAACA AACCCTCAAC CAATTACTCA CAGAAATGGA TGGCTTTGAT GCTAATACAG GTGTAATTAT CATCGCCGCT ACCAACCGTC CCGAAGTTCT AGACCCTGCT TTGCGCCGTC CTGGTCGCTT TGACCGCCAA GTCGTAGTCG ATCGCCCTGA TAAAATTGGT CGAGAAGCAA TTCTCAAAGT CCACGCCAGA AATGTGAAAT TAGCGAATGA TGTCGATTTA GGTAACATCG CTATCAAAAC ACCTGGTTTT GCTGGTGCAG ATTTAGCCAA TCTTGTGAAT GAAGCTGCAC TATTAGCCGC CAGACAAAAT CGCCAAGCTG TCGTGATGGC TGATTTCAAC GAAGCTATTG AAAGGTTAGT AGCTGGCTTA GAAAAACGTT CTCGTGTCTT GAATGAAACC GAGAAGAAGA CCGTCGCCTA TCACGAAGTT GGTCACGCCA TTATCGGCGC ATTAATGCCG GGCGCTGGTA GAGTTGAGAA AATCTCTGTT GTTCCTCGTG GTGTTGGCGC TTTGGGTTAT ACAATTCAAA TGCCTGAAGA AGACCGCTTC TTGATGATTG AAGATGAAAT TCGCGGGCGA ATTGCTACTC TGTTGGGTGG ACGTTCGGCG GAAGAAACAG TCTTTGGTAA AGTCTCCACC GGTGCAAGCG ATGACATTCA AAAAGCCACG GACTTAGCAG AACGTTACGT CACTTTATAT GGAATGAGTG ACAAATTAGG GCCAGTAGCT TTTGAGAAGA TTCAACAACA ATTCCTCGAA GGTTACGGTA ATCCTCGCCG TTCCATTAGT CCCAAAGTAG CTGAGGAAAT CGACCGCGAA GTGAAGCAGA TTGTAGATAA TGCTCACCAC ATCGCCTTGA GTATCCTGCA AAATAACCGT GACTTGTTGG AAGAAACTGC ACAGGAACTT CTGCAAACAG AAATTCTCGA AGGTGCTGCA CTCAGGGAAC GCCTCAGCCA AGCTCAAGCA CCAGAAGAAC TACAAGAATG GTTGCGGACA GGTAAGATAT CGGAAGATAA ACCCCTAATG CAAACACTTC TGGTCTAA
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Protein sequence | MPVETDKKNS IKPPRLRQFG GSFLILLTLL LLLNFIVPSF SGPRLPQVPY SDFIAQVQAG KVDKAIVGGD RIQYSIKTQT PDGKVVDQVF ATTPVAIDLD LPKILRENNV EFAAPPPDQN GWIGTLLSWV APPLIFFGIW AFLINRQGGG PAALTVGKSK ARIYSEGSTG VKFLDVAGVD EAKAELEEIV DFLKNATKYT NLGAKIPKGV LLVGPPGTGK TLLAKAIAGE AGVPFFSISG SEFIELFVGV GAARVRDLFE QAKKQAPCIV FIDELDALGK SRGGAGGFVG GNDEREQTLN QLLTEMDGFD ANTGVIIIAA TNRPEVLDPA LRRPGRFDRQ VVVDRPDKIG REAILKVHAR NVKLANDVDL GNIAIKTPGF AGADLANLVN EAALLAARQN RQAVVMADFN EAIERLVAGL EKRSRVLNET EKKTVAYHEV GHAIIGALMP GAGRVEKISV VPRGVGALGY TIQMPEEDRF LMIEDEIRGR IATLLGGRSA EETVFGKVST GASDDIQKAT DLAERYVTLY GMSDKLGPVA FEKIQQQFLE GYGNPRRSIS PKVAEEIDRE VKQIVDNAHH IALSILQNNR DLLEETAQEL LQTEILEGAA LRERLSQAQA PEELQEWLRT GKISEDKPLM QTLLV
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