Gene Ava_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2217 
Symbol 
ID3679696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2753243 
End bp2754649 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content47% 
IMG OID637717559 
Productglycosyl transferase family protein 
Protein accessionYP_322730 
Protein GI75908434 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.368513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGA ATTCCTGGCC CGACAACGAT TCCTACAAAG AGCTTGATCC ACTCAATTCC 
TTGTTGTCTG AAGTATCAAC AACAGAGGAA TCAGTAGTGG AAACACGGGA TTTGTCTCTA
CCATCCCGGT TTCAAGGACG TAGAGGGAAA GCTGCTCTAG TTTTAACAAT CGTCTGGAGT
GGCACGATCG CTCTACATTT GGTTTCCTGG GGTTCTATTT TTATACTAGG GTTGACTACC
GTTTTAGGTA TTCATGCTTT AGGAGTAGTT TTTGCTCGAC CCCGCCACTA TCAAAAAGAG
ATGCAGGGTA GTTTACCTTT TGTATCTATA TTGGTAGCGG CGAAAAATGA GGAAGCTGTC
ATTGCTAAAT TAGCGAGAAA TCTTTGTAAT CTGGAATATC CCAACGGGCA ATACGAAGTT
TGGATAATTG ATGATAATAG TAGCGATAAA ACGCCCCATA TCCTAGCAGA ACTGGCAAAA
GAGTACGACA AACTAAAAGT CCTCAGACGT TCAGCCCAAG CTACTGGTGG TAAATCAGGG
GCATTAAATC AGGTTTTACC ATTAACTCAG GGTGAAATCA TCGCCGTGTT TGATGCTGAT
GCTCAAGTAG CGTCAGATAT GCTACTCCAT GTAGTACCTT TGTTTCAACG GGAAAAGGTG
GGGGCGGTGC AGGTGCGAAA AGCGATCGCC AACGCCAAAG AAAATTTCTG GACAAAGGGG
CAAATGGCGG AAATGTCGCT GGATATTTGG TTCCAGCAAC AGCGTACCGC CCTGGGAGGC
ATCGGTGAAC TGCGGGGGAA CGGTCAATTT GTGCGCCGCC AAGCCTTGGA TAGCTGCGGC
GGTTGGAATG AAGAAACAAT CACTGATGAT TTGGATCTGA CTTTCCGTCT GCATCTTGAC
AAATGGGATA TTGAATGCTT ATTCTATCCA GCCGTGCAGG AAGAAGGCGT AACGACGGCG
ATCGCTCTTT GGCATCAGCG CAATCGCTGG GCGGAAGGTG GCTATCAGCG CTATTTGGAC
TATTGGGATT TGATTCTCAA AAACCGCATG GGTACGCGGA AAACTTGGGA TATGTTGATG
TTCATGCTGA CGATGTATAT CTTGCCGACA GCAGCAATTC CCGATTTACT CATGGCTGTT
GTCCGCCATC GTCCGCCAAT GCTAGGCCCC GTAACAGGCT TGTCTGTAAC TATGTCCGTC
GTCGGAATGT TTGCTGGTTT ACGGCGCATA CGACAAGAAC AAAAATTCCA AGTTCATACC
CCCTTTGTCT TGTTACTACA AACAATGCGT GGCACGTTAT ATATGTTGCA CTGGTTAGTA
GTGATGAGCA GCACCACAGC GCGGATGTCA TTCCGACCCA AGCGCTTGAA GTGGGTGAAA
ACCGTGCATA CAGGGAGTGG GGAATAA
 
Protein sequence
MPANSWPDND SYKELDPLNS LLSEVSTTEE SVVETRDLSL PSRFQGRRGK AALVLTIVWS 
GTIALHLVSW GSIFILGLTT VLGIHALGVV FARPRHYQKE MQGSLPFVSI LVAAKNEEAV
IAKLARNLCN LEYPNGQYEV WIIDDNSSDK TPHILAELAK EYDKLKVLRR SAQATGGKSG
ALNQVLPLTQ GEIIAVFDAD AQVASDMLLH VVPLFQREKV GAVQVRKAIA NAKENFWTKG
QMAEMSLDIW FQQQRTALGG IGELRGNGQF VRRQALDSCG GWNEETITDD LDLTFRLHLD
KWDIECLFYP AVQEEGVTTA IALWHQRNRW AEGGYQRYLD YWDLILKNRM GTRKTWDMLM
FMLTMYILPT AAIPDLLMAV VRHRPPMLGP VTGLSVTMSV VGMFAGLRRI RQEQKFQVHT
PFVLLLQTMR GTLYMLHWLV VMSSTTARMS FRPKRLKWVK TVHTGSGE