Gene Ava_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2201 
Symbol 
ID3679680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2732243 
End bp2734315 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content38% 
IMG OID637717545 
Producthypothetical protein 
Protein accessionYP_322716 
Protein GI75908420 
COG category[L] Replication, recombination and repair 
COG ID[COG0419] ATPase involved in DNA repair 
TIGRFAM ID[TIGR03185] DNA sulfur modification protein DndD 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.668811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.078416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA CTTCAATTAA ACTATGCAAT TTTCGCTCCT TTTATGGCAG AACACCAGAG 
ATAGTTATTG CTGGAGGAGA TGTTCTTAAC ACTACGATTA TTCATGGGAA TAATGGCTCA
GGTAAAACTA GTTTACTGAA TGCCTTTACG TGGGTATTAT ATGAGAAGTT TAGTGCAGCG
TTTGCCTCGA TAGAACAACT GGTGAATAAA AGAGCGATCG CTGAAGCTAA ACTCGGACAA
GCTGTAGAAT GTTGGGTAGA GATTAACTGG GAACACGAAG GTAAACGCTA CAACGTCAAA
CGCCAATGTA AAGGCTATAA AAATAAAACC GACTTTGCTG TGGGTAAAAC AGAATTACTC
ATGCAGGTAG CTGGGGATGA TGGCAGATGG TATTACCCCA GCCAACAACC AGAAGAAATC
ATTGGACAGA TTTTACCAGT TAGCTTACAT CAATATTTTT TCTTTGACGG CGAACGCATA
GAAGAAATCG TGCGTTCTGA TAAAAAAGCG GAAATTGCCG AAGCGACTAA AATCTTCTTG
GGTGTGGAAG TAATTAACCG TTCTATCAGA CATTTAGGTG AAGCTAAAAA AAGTTTAGAA
AATGAGTTAA AAGCAATTGG TGACTCCGAG ATTAAACAGC TGTTGCGTGA ACAAGAGAAA
CTAGAACAGG AAATTGAACG CATTCACACC AGACAAACAG AAATTAAGCA AGAGTTAGAA
TATCAACAGA CCTTTAAGAA AGAAACGGGT AATCGTTTAC AAGAATTAAG TGCAGCCAAG
GAACTGCAAC AAAGACGACA AGAACTAGAA AATCAAAAAA ACTCCAATCA AGAAAGCCTC
AGACAAACTA GAGAATCACT AAAGAAAATT ATTTCTGCAC GGGGTTACAC AGTATTATTA
TCAGATACTA CAGCCCAGTT TCGGACGATT ATAAATCAAC TTAAGCAACA AGGTGACTTA
ACCTCTGGCA TTTCACGAGA ATTTATTCAT GAATTATTAA AGTCCCAACG CTGTATTTGT
GGTGCAGAAT TACATGAAGG TAATCATGCT CACACAAATG TGAGTCTCTG GTTAAATCAA
GCAGGTTCCT CGGCGGTGGA AGAAACAGCA ATTCGCATGA GCGCTCAAGT AGACGAAATT
GATAAACAAG CGATCGTATT TTGGGAAGAA GTTGATAAGG AACAAGCGAG AATCAATCAG
TTACGGCAAA ATATATCTCA AGTTGAAAAC GAATTAGAAA CTATTCAAGA ACGCTTACGC
AAAGACGCTA ACGAAGAAAT TAGCAGTTTA CAAAAGCGGT TAGATGAGAT TGAAAGTAAA
ATTGATGAAT TAAATAGAGA ACAAGGTGCA AATCAGCAAG AAATTTCTCA TGTACAGGCT
GATATTGATG CTTTAGTTAA ACAAATTGCT AAACAAAAGC TCAATGAAGA AAAGCAGTTA
TTGGCACAAA GGCGGATTAA CGCTACACAA GACGCAATTG AACGCTTAAC AGAAGTCAGA
AATCGCCAAG AAAATCAGTT TCGACTGCAA TTAGAAAAGC GCTTGCAAGA GATATTTAAC
TCCGTATCTT TTACGCCTTA TGTACCTAAA ATCAGTGATA AATATGAATT GACTCTTGTA
GAAAGTACAT CAGGAATGGA AGCATCAGTT GCAGCCTCTA CTGGTGAAAA CCAAATCCTG
AGCTTGTCTT TTATTGCCAG TATTATTGAT AAAGTTAGAG ATTGGAGCGA AAAACGCAAA
ATCTTAACAG TACCCGATAG CAGTACTTTT CCCATCGTCA TGGATTCCCC ATTTGGAAGT
TTAGATGAAA CCTATCGCCG ACGCATTGCT CAAACATTAC CGGAGTTAGC TAATCAGTTA
ATAGTGTTAG TCACAAAAAC TCAATGGCGG GGAGAAGTGG AAACAGAGAT GACAGATAGA
ATTGGTAGGG AATATGTGCT GACTTACTAC TCTTCTAAGC CAGATTGTGA ACAAGATTAT
ATTGAATTGG GTGGGGGAAG ATATCCTTTG GTGAAACAAA GCCCGAATGA ATTTGAATAT
ACCGAGGTGA TAGTGGTAGA GAGGGAGTGG TGA
 
Protein sequence
MKLTSIKLCN FRSFYGRTPE IVIAGGDVLN TTIIHGNNGS GKTSLLNAFT WVLYEKFSAA 
FASIEQLVNK RAIAEAKLGQ AVECWVEINW EHEGKRYNVK RQCKGYKNKT DFAVGKTELL
MQVAGDDGRW YYPSQQPEEI IGQILPVSLH QYFFFDGERI EEIVRSDKKA EIAEATKIFL
GVEVINRSIR HLGEAKKSLE NELKAIGDSE IKQLLREQEK LEQEIERIHT RQTEIKQELE
YQQTFKKETG NRLQELSAAK ELQQRRQELE NQKNSNQESL RQTRESLKKI ISARGYTVLL
SDTTAQFRTI INQLKQQGDL TSGISREFIH ELLKSQRCIC GAELHEGNHA HTNVSLWLNQ
AGSSAVEETA IRMSAQVDEI DKQAIVFWEE VDKEQARINQ LRQNISQVEN ELETIQERLR
KDANEEISSL QKRLDEIESK IDELNREQGA NQQEISHVQA DIDALVKQIA KQKLNEEKQL
LAQRRINATQ DAIERLTEVR NRQENQFRLQ LEKRLQEIFN SVSFTPYVPK ISDKYELTLV
ESTSGMEASV AASTGENQIL SLSFIASIID KVRDWSEKRK ILTVPDSSTF PIVMDSPFGS
LDETYRRRIA QTLPELANQL IVLVTKTQWR GEVETEMTDR IGREYVLTYY SSKPDCEQDY
IELGGGRYPL VKQSPNEFEY TEVIVVEREW