Gene Ava_2199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2199 
Symbol 
ID3679756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2730267 
End bp2731745 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content42% 
IMG OID637717543 
ProductType III restriction enzyme, res subunit 
Protein accessionYP_322714 
Protein GI75908418 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.216053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTGA AGCAAGAACC AGTGCAGCAA TTTCCTGCTT TCCGGCTCAA ATTACCATCT 
GTCAGGGAAA GCCAAGGTAG TTATCAGACT CAGCCATTAC CAGGGTGTCC TAGAATGCCG
TTATCTGTGC AGTTGCGCCA GTATCAACGT CAAGCTATGA CTAACTGGTT TGCGAACAAT
GGCCGAGGAA CGCTGAAGAT GGCGACTGGT AGCGGGAAAA CCATAACTGC ACTGGCGATT
ACTTGCGAGT TATACCAGCA GATTAGTTTA CAGGTGTTGT TGGTGGTGTG TCCCTATCGT
CATTTGGTGA CACAATGGGG GCGAGAATGT GAAAAGTTTA ATTTACGACC TATACTAGCC
TTTGAGAATT TACGCAGTTG GCAAAGTCAA CTTTCTACCC AACTTTACAA TCTGCGTTCT
GGTTCTCAAG GTTTTGTGAC TGTGATTACT ACCAATTCCA CCTTAATTGG GGATGGGTTT
CAGTCACAAC TCAAGTATTT TCCAGCGAAG ACTTTAATTA TTGGTGATGA AGCCCATAAT
TTAGGCGCAC CTAAGTTAGA AGAAAGTTTA CCTCGGCGGG TGGGTTTACG GTTGGCTTTA
TCGGCGACAC CAGAAAGATA TTTTGATGAT GGTGGTACCC AATCTTTATT TGATTACTTC
GGCCCAGTGT TACAGCCGGA GTTTACTTTA CGGGATGCGA TCGCTCAAGG TGCTTTGGTA
CATTACCTAT ATTATCCCAT CTTAGTAGAG TTAACTGAGG CGGAAAGTAT TGCTTATTTG
AAACTAACTA AACGTATCGG GCGATCGCTA TTATATAGAG AACGCAATAA TGGCGAATCA
TCTAATTTTG AAGATAACGA AGATTTAAAG CCTTTATTAA TGCAACGCGC CAGATTAATT
GGTGCAGCAG CAAATAAATT AAATGCTTTA CGTCAATTAA TGGCTACTCG CCGAGAAACC
ACTCATACGC TTTTTTATTG TAGTGATGGT TCCCTAGAAA CAGGACAACG TTCATCTCTG
CATCAACTCA AAGCTGTGGC AAAAATTCTG GGCGGAGAAT TAGGCTATAA GGTAAGTACA
TACACAGCCC AAACATCTTT ACAAGAAAGA GAAATTTTAC GTCGTCAATT TGAAAGCGGT
GCATTACAAG GTTTAGTGGC AATTCGTTGT TTAGATGAAG GGGTGGATAT TCCAGCAATT
CAAACGGCGG TGATTTTATC CAGTTCTGGT AATCCTCGTC AGTTTATTCA GCGACGGGGT
AGGGTTTTAC GTCCTCATCC GAGTAAGGAA AGGGCTACTA TCTACGACAT GATTGTTTTA
CCGCCAGATT TGGATAGGGA AACTATAGAA GTTGAACGCA ATCTGTTAAG AAAAGAGTTG
CGGCGCTTTG TGGAGTTTGC CGATTTAGCT GATAACGCTG GTGAAGCTCG CATCAAGTTA
CTGGATTTAC AAAAGCGATA TGGATTGTTA GATGTTTAG
 
Protein sequence
MYLKQEPVQQ FPAFRLKLPS VRESQGSYQT QPLPGCPRMP LSVQLRQYQR QAMTNWFANN 
GRGTLKMATG SGKTITALAI TCELYQQISL QVLLVVCPYR HLVTQWGREC EKFNLRPILA
FENLRSWQSQ LSTQLYNLRS GSQGFVTVIT TNSTLIGDGF QSQLKYFPAK TLIIGDEAHN
LGAPKLEESL PRRVGLRLAL SATPERYFDD GGTQSLFDYF GPVLQPEFTL RDAIAQGALV
HYLYYPILVE LTEAESIAYL KLTKRIGRSL LYRERNNGES SNFEDNEDLK PLLMQRARLI
GAAANKLNAL RQLMATRRET THTLFYCSDG SLETGQRSSL HQLKAVAKIL GGELGYKVST
YTAQTSLQER EILRRQFESG ALQGLVAIRC LDEGVDIPAI QTAVILSSSG NPRQFIQRRG
RVLRPHPSKE RATIYDMIVL PPDLDRETIE VERNLLRKEL RRFVEFADLA DNAGEARIKL
LDLQKRYGLL DV