Gene Ava_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2140 
Symbol 
ID3680281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2647036 
End bp2649147 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content44% 
IMG OID637717483 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_322655 
Protein GI75908359 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4935] Regulatory P domain of the subtilisin-like proprotein convertases and other proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA CCTACGGTAA TCAACGCAAT AACCCTTCTG ATTTTTCAAC CACAGGTGCA 
AGCAAATTGG GATTAGTTTT GCAACGGGGT GGAGAAGAAT TGATACTGGA AAAGGCATTA
GACCGCTTCA CCATCCGTTT TGTCACCGAT TTTCCTGTGC AACAATTATC TCAGGTTAGT
TGGGGTATTT GGCATAGCAG TATTACCCAA GCTCAATTAG AACTATACCA GGTTGCGCCC
AACCAAATAG AAGAGGCGAT CGCTCAAGCC CGCGCTGACC AAAATGTCAC TTTTGCTAGT
CATGCTTACA CCATTAAGGA TAATCCTGGG ACATTTGTTT ATCTCAGCGA CCAAATTACA
ATTCAATTTG CGCCTAAGTT AGATGCTGTC AAAATTACCC TCATAGCCTC TCAATTCAAC
CTAGTTGAAG ACAAGCCAAT TCCCGGTTTA CCGAATGCGT TTGTATTTTT GGTTAGCAAA
CAAGCTACAG AAAATCCCGT CAAAATTGCT AATCAATTAC AAAGCATCCC CGAAGTTTTG
GCGGCTGAAC CGAATGTATT AATACAAGCG GAAACCCACT ATAAACCCAG TGACAACCTT
TATCCCCAGC AATGGTATCT CAACCACAAC GGTGGTAATG AGTTGGCTAC CAGTTCCCAC
ATCGCTGTAG AACAGGCTTG GGACATTACA CGCGGTGTCC GTTCTGTTGT GGTGGCTGTG
GTGGATGACT CCTTTGATTT AAATCACCCA GATTTTCAAG GTAGCGGTAA GATTGTAGCT
CCTAGAGATT TAAGAGAAAA TGACTTTTTA CCTTTACCAG GGGGGAAAGA AAAGAGTCAT
GGTACTGCTT GCGCTGGTAT TGCCTTAGCG GAAGAAAACG GTGCGGGAAT TGTCGGGGTT
GCTCCTGGTT GTGCATTAAT GCCTATTCGT ACCACAGGTT TTTTAGATGA CGAATCCATT
GAGCAGATAT TCAACTGGGC TATAGAAAAA GGAGCCAGTG TAATTTCTTG CAGTTGGGGA
GCTTCGGCAG TGTATTTCCC CTTATCATTG CGTCAAAAAG CTGCTGTTAC TAGGGCAGCT
ACCCGTGGAC GTAACGGTAA AGGTTGCGTA GTCCTATTCG CTGCTGGTAA CGCCAACCGT
CCAGTTAGTG GCGCTATTTA TGAACAAGAT TGGCCAGATA ATGTTCTACA AGGTGTGACA
GATTGGTTAA ATGGTTTTGG CGTACATCCT GATGTGATGA CGATCGCTGC ATCTACTAGT
ATGAGTAAAA AGGCCGCCTA CAGTAATTGG GGACTGAATA TTTCCCTATG TGCGCCTAGT
AACAATGCCT CACCGGGAAT GTCTTTTCCA GAGAAGGGTT TTTTGTATAC ACAACCAAGC
ATCAAAACTA ACTTGAGTGG GTTAGGAATG CTCACGGCTG ATATTGTAGG AGCCGCAGGT
TATGACCCTG GTAACTTCAC TAGTAACTTT GGCGGTACTT CCAGCGCCAC CCCTGTAGTT
GCTGGGGTAG CAGCCCTCGT TTTATCAGTT AATCCTGACT TGACAGCCCA ACAAGTCAAA
CGAATTTTAG AAACAACAGC AGATAAAATT GTAGACCCTG ACCCCGACCC CCAACTGGGG
TTGAGTGAAG GCAAATATGA TAAAAATGGT TACTCTCAGT GGTTCGGTTA TGGTAAGGTC
AATGCTGCTA GGGCAGTACA AGTGGCATTA CAACAACGAA CCACATTATC AGATGCTAGT
AAACAAGTAA AAATTAGTAA TTCTAACCGA TTAGAGATTC CTGATAATAA TATCCAAGGC
ATTAAAAGTA CAATCTCCGT TGCCGATGGT AGCAGCGTTA AAGATATTCA AGTCGCCGTT
AATTTAACTC ACGATTTTTT AGGCGATATA GAAATTTATT TAATCGCCCC CAATAACCAG
CAAGTGCTAT TGCAAAATCG GACTTTAGGA AATCGCACAG ATTTACAAAT AACTTATGGA
GTGCGATCGC ATCCTACCCT GAAACAGTTG CTCTCACAAT CAGCCACAGG CAATTGGCAG
TTATGGATAA TTGACTACTC GCCCCAAGAT ATCGGCAGAC TCAACAGTTG GGAATTAACA
TTAGGAATTT AG
 
Protein sequence
MNDTYGNQRN NPSDFSTTGA SKLGLVLQRG GEELILEKAL DRFTIRFVTD FPVQQLSQVS 
WGIWHSSITQ AQLELYQVAP NQIEEAIAQA RADQNVTFAS HAYTIKDNPG TFVYLSDQIT
IQFAPKLDAV KITLIASQFN LVEDKPIPGL PNAFVFLVSK QATENPVKIA NQLQSIPEVL
AAEPNVLIQA ETHYKPSDNL YPQQWYLNHN GGNELATSSH IAVEQAWDIT RGVRSVVVAV
VDDSFDLNHP DFQGSGKIVA PRDLRENDFL PLPGGKEKSH GTACAGIALA EENGAGIVGV
APGCALMPIR TTGFLDDESI EQIFNWAIEK GASVISCSWG ASAVYFPLSL RQKAAVTRAA
TRGRNGKGCV VLFAAGNANR PVSGAIYEQD WPDNVLQGVT DWLNGFGVHP DVMTIAASTS
MSKKAAYSNW GLNISLCAPS NNASPGMSFP EKGFLYTQPS IKTNLSGLGM LTADIVGAAG
YDPGNFTSNF GGTSSATPVV AGVAALVLSV NPDLTAQQVK RILETTADKI VDPDPDPQLG
LSEGKYDKNG YSQWFGYGKV NAARAVQVAL QQRTTLSDAS KQVKISNSNR LEIPDNNIQG
IKSTISVADG SSVKDIQVAV NLTHDFLGDI EIYLIAPNNQ QVLLQNRTLG NRTDLQITYG
VRSHPTLKQL LSQSATGNWQ LWIIDYSPQD IGRLNSWELT LGI