Gene Ava_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2129 
Symbol 
ID3680270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2631982 
End bp2632362 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content39% 
IMG OID637717472 
Producttranscription regulator containing HTH 
Protein accessionYP_322644 
Protein GI75908348 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAC CCCGTCCGAT TCGTAATGAA GCTGATTATC GTGCGGCGCT TGATGAAATT 
GCAAGATTGT TCGATTCAAA ATTAAATACA CCAGAGTCTG ACAAGTTGGA AGTATTAACT
ACACTTGTGG AAGCCTACGA ACAAAAACAT TACCCAATTG CAGCACCAGA TACTATTGAA
GAAATCTTAT ATTATCTTGA ATCCCGTGGG TTATCTGTAA ATGATTTAGA GCCTGTCATT
GGCAGCAAAA CAGAAATCAG CAACATTTTA CATCGTAGAC AGGCGTTAAC TTTGGAAATA
ATTCGGCGTT TACATCAACA ATTGGGGATT CCAGCAGAGG TTTTAATTCA ACCATACTCC
TTGATGGAAA ATTCAGCTTG A
 
Protein sequence
MLEPRPIRNE ADYRAALDEI ARLFDSKLNT PESDKLEVLT TLVEAYEQKH YPIAAPDTIE 
EILYYLESRG LSVNDLEPVI GSKTEISNIL HRRQALTLEI IRRLHQQLGI PAEVLIQPYS
LMENSA