| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2104 |
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| Symbol | |
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| ID | 3680362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2599387 |
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| End bp | 2604045 |
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| Gene Length | 4659 bp |
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| Protein Length | 1552 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637717449 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_322621 |
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| Protein GI | 75908325 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.581911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.024962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATC TACCTAATTC CCATAACTTA ACCCCTGAGA ATGAGCAGTC GTTACAAACT
TTGGTCAGGG CAATTACTTT TTCCCAGGGA GAATTTTCTT TAATATTATT GCGTTGTAAT
TACGCGGCTT TGCGTAAACG CATTACCCAA CAACTACACC AAATTTCTCC AATCAAAATA
CATGAAATCA CTTTACCAGA AACAGTAAAA ACACTGTACA CCAACATAAA TGAACAATTA
GGCGATGAAC AACCACCCGC ATTGATTGTC TTTGGCTTAG AGTCAGCTAA AGACATTGAT
ACTGTGCTGA CTGCGGCTAA CCGAGTCAGA GAAGAGTTTA GGAAAAACTT TCCCTTCCCC
ATACTTATCT GGGTTAATGA CCAAGTTCTC CAAAAGTTTA TTAGATTAGC TACCGATTTA
GAAAATTGGG CAACTATTAT TGCATTTGAA AGTAGTACTA ATGAATTAAT TAGTTTTATT
CAGAAAAAAA CTGACGAAGT TTTTATAGGT GATTTAATTC CCAATCCACA AATTTGTTGG
GAATTGAATC GAGGAATTCA AGATTTACAA AACCGAGGTA GAGAATTAAA TCAAGTAATC
CAAGCTAACT TGGAGTTTGT CCGGGGTTTA CATGATTATT TATACGATAA TACAGACTCT
GCTTTGGCTC ATTATCAAGA TAGTTTGGAT TTTTGGCAAA AAAATCATAA TTTGAAACGG
CAAGGAATAT TACTATTTAA TATTGGTTTG ACTTATGTGA GACAGGCGCA GAAGAATCAG
ATAGATAATC AGGACTGTTA CCAAAAAGCT AGGAAATATC TTCAGCGATG TATTGCAATT
TTAGAAAAAG GACACTTTGA TAATTTAATC GCTAAGTATA TTAATACGTT AGGAGAGGTA
TTAAGAAACT TAAATGCTTG GCCAGATTTA TATAACCTAG CACATAAATC ATTGAAACTA
CATAAAAATT ATGGACAATC GCTAAAAATA GCCCAATCTT ATGGATTTTT AGCTGAAGTT
TCTTTAGAAA GTTTTCAATG GTATGAAGCT AAAAAACTTG CTCAAAAAGC ATTACAAAGA
CTGAAGAATA TATCAAATCA AAAAGTCCCT GAACGGAGTT TATATCTATT TATTTTAGCC
CGTTCTCAAA AAGAGTTAAA TGAGAATACT GATGCTATTA GTAATTTATT GGCAGCTAAA
AATGAAACTT GTGCTTACTA TAATCCCAGA CTTTATATTA ATATTTTAGA GATGTTAAGT
AACGTCTACT TTGAGCAAAG TCAATATTTA GCAGCTTTTC AAATTAAACA AGAGCAACTA
CAAATTGAAC AACAGTATGG TTTTCGTGCT TTTGTTGGTG CATCTTATCT TAATCCCCAG
CTTCAGGCGA TTAATCCTGC CCAATTACAA GTATACAGAA AGGGAACAAT TGCTCAAGAA
ATAGTTGCTT CTGGTCGAGA AAAGGATGTT CAACGTTTGC GAGAAAGGAT TAGTAGCACT
GAACATAAAT TGACTGTCAT TCATGGTCAA TCAGGTGTGG GTAAAAGTTC TATTTTACAA
GCTGGTTTAA TACCCGCTTT GCAAGAAAAG CCGATTGCTG AACGTGATGC TTTACCTCTA
TTGTTACGAG TGTATACAGA TTGGGTAGGA ACATTAGGAC AAAACTTAGC ACAAGCTGTT
GAAGAAGTTA GAGGCTATAA GTTATCTCAT GATCTTAATT CAGCCCTAGC CATTAGAGAG
CAATTACAGA AAAATTCTGA GCGCCATCTG TTAACAGTGT TAATTTTTGA CCAATTTGAG
GAATTTTTCT TCGTTTATAC AGATAAAGCT AGCAGAAAAG CATTTTACGA GTTTTTACGC
TTTTGTTTGG ATATACCTTT TGTCAAGATT GTACTTTCGT TGCGGGAAGA TTATTTACAT
TACTTACTAG AGTTAGAACG ATTATTTAAT TTGGGGTCAA TTAATAATAA TATTTTAGAT
AAAAATATTC GCTATTATTT GGGTAATTTT ACCCCAGCAG ATGCCAAAGC TATTATTCAA
AACCTGACAG AGAAAACACA CTTTTACCTA GAACCTAAAC TCATAGATAA GCTAGTTGAA
GATTTATCAT GCCAATTTGG GGAAGTGCGA CCCATTGAAT TACAGATTGT GGGGGCGCAA
ATGCAAACAG AAAAAATTAA TACTCTGGCA AAATATTGTC AGTTTGGTAC TAAAGAAAAA
TTAGTAGAAA GGTTTTTAGA AACAGTTATT AGAAATTGTG GTTCTGAAAA TGAACAAATG
GCGCGCCTAG TACTATATTT ACTCACAGAC GAAAACGGTA CTCGTCCTCT CAAAACTCGG
ACTGATTTGG CATCAGATTT AAAACCAGAG GTAAAAACAT TAGATTTAAT CTTAGAAATT
TTTGTGAAAT CTGGATTAGT GTTACTTTTA CCAGAAGTAC CAGCAGATCG CTATCAATTA
GTACATGATT ATTTAGTCCC GTTCATTCGT CAACAGCAGG GAAATGAGTT ATTGGCAGAA
CTCGAACAGG AACGGGAACA AAGAAAACAG ATTGAACAAG AGCTAGAGCG GGTAGAAACC
ATACTAACTC AAGTCAACGC AGAACTAGAA AAACAACAAA TTGTCCTCAG AGAAGTACAA
GCAGGGACAA CCTTAGAACA GGAAGGAGTC AGCGCTTTAC GTCAGTTTGA TTTTGCACAA
TTAGACTCCC TTATGTCAGC AATGCGGAGT GGAAAAGCTT TGCAAGCTTT AGTCAAAGAT
GGTCGCTCTT TGGCAAAATA CCCAGCAACT AGTCCATTAC TAGCTTTGCA GACAATTCTA
GACAATATCC AAGAGCGTAA TCAGTTCCAA GGGCATCAAG GCTGGGTCAG GAGCGTCAGT
TTTAGTCCTG ATGGTGAGTA TATCCTTACG GCTTCTGATG ACTGTACCGC CAGATTATGG
AATCTCCAAG GCAAGCAATT AATTTCATTA CAAGGGCATG AAGATACAAT CTGGAGTGCC
AATTTCAGCC CTGATGGCAA ATACATGGCG ACTGCTTCCT CTGACCGGAC AGCCAGGTTA
TGGAACTTTA GGGGTCAACA ATTAGCTAAA ATTCAAGGGC ATCAGGGCTA TGTGCGGAGT
GTGAGTTTCA GCTCTGATGG TAAGTACATC GCCACTAGTT CTGATGACCG CACAGCTAGG
TTATGGAATT TTAGCGGTCA GCAGCTAGCG CAGTTTTCCG GACATCAAGG AACCGTCTGG
TGTGTCAGTT TTAGCCCTGA TGGTAAACAC ATTGCCACAG CTGCTGATGA CCGAATAGTC
CGGTTATGGA ACCTCAAGGG TAAATTGCTT GTCCGCTTCC CAGGACATCA AGATTGTGTT
TGGGATGTAA GTTTTAGCCC CGATGGTCAG TATGTTGCTA CCGCCTCCTC TGACGGTACA
GCCCGATTAT GGAACCTAGC CGGGGAACAG ATAAGCCGAT TTCGCGGCCA TCAAGATGTG
GTTTGGAGTG TGCGTTTTAG CCCCAATGGT AAATATATCG CTACAGCTTC CTCTGACCGC
ACCGCTAGGG TTTGGAATCT CAATGGTCAG CAACTAGAGC AATTCCCAGG ACATCAGGAC
TACGTGCGGA GTGTGAGTTT TAGCCCTGAT GGTAAATATA TTGCAACTGC ATCTTCTGAC
CGCACAGTCC GATTGTGGTA CCTAAACAAG CAGCAATTCC CCCCATTTAG AGGACATCAG
AGTACAGTTA GGAGCATAGA TTTTAGCCCT GATGGGCAAC AGGTCGTTAC GGCTTCTGAT
GACCGGACGG TACGTTTGTG GAGTATTCAA GGTGAGGAGC TTTTACAGTT CCTTGGACAT
CGAGGAAAAG TTTGGAGTGT GAGTTTTAGC CCCGATGGTA AATACATTGC TACTACTTCC
TCTGACCGGA CGGTGCGATT ATGGGATGTT ACAGGGCAAA TGCTTCAGCA ATTTCCAGGG
CATCAAGGTA CAGTTTGGAG TGTGAATTTT AGCCCTGATG GCCAGCATAT CGCTACTGCT
TCTTCTGACT TGACGGCTAG ATTATGGAGT CTTGATGGTC AGGAGTTGAT GCGATTTAAA
GGGCATGATA AATGGGTGCG ATATGTGAGT TTTAGTTGTA ATGGAGAGCA TCTTGCCACT
GCGGCTGATG ATTGTACAGC TAGATTGTGG AATCTCCAGG GACAACAGGT GGGGCAATTC
TTGGGGCATC AAAGTACAGT TTGGAGTGTG AATTTTAGTC CTGACTGTCA ATATCTGGTG
ACTGCTTCGG AAGACCATAC AGCCAAGTTG TGGACTCTGG ATGGGCAAAT ACTCACAGAA
TTTAGAGGAC ATCAAGCCCC CCTGAAAAGT GCCGTTTTTA GTCATAATGG GCAGTATATC
GCCACTAGTT CCGACGATCG CACCGTTCGG TTATGGAATC TTAACGGACA GCAAATAGCA
CAATTTAAAG GACATAAAGG TGCAGTCAGA AGTATTAGTA TTAGTCCTGA TGATCAGTAT
ATTGCCACAG CTTCTGATGA TCGCACCGTG AGATTATGGC CGATAGAAAA TTTAGACCAA
CTACTCCGGC GTGGTTGCAA TTGGCTACAA GATTATCTAG AGAATAACAC TCATGTCACA
GAGAGCGATC GCCGTCTGTG CGAGATATTA AAGTATTGA
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| Protein sequence | MNNLPNSHNL TPENEQSLQT LVRAITFSQG EFSLILLRCN YAALRKRITQ QLHQISPIKI
HEITLPETVK TLYTNINEQL GDEQPPALIV FGLESAKDID TVLTAANRVR EEFRKNFPFP
ILIWVNDQVL QKFIRLATDL ENWATIIAFE SSTNELISFI QKKTDEVFIG DLIPNPQICW
ELNRGIQDLQ NRGRELNQVI QANLEFVRGL HDYLYDNTDS ALAHYQDSLD FWQKNHNLKR
QGILLFNIGL TYVRQAQKNQ IDNQDCYQKA RKYLQRCIAI LEKGHFDNLI AKYINTLGEV
LRNLNAWPDL YNLAHKSLKL HKNYGQSLKI AQSYGFLAEV SLESFQWYEA KKLAQKALQR
LKNISNQKVP ERSLYLFILA RSQKELNENT DAISNLLAAK NETCAYYNPR LYINILEMLS
NVYFEQSQYL AAFQIKQEQL QIEQQYGFRA FVGASYLNPQ LQAINPAQLQ VYRKGTIAQE
IVASGREKDV QRLRERISST EHKLTVIHGQ SGVGKSSILQ AGLIPALQEK PIAERDALPL
LLRVYTDWVG TLGQNLAQAV EEVRGYKLSH DLNSALAIRE QLQKNSERHL LTVLIFDQFE
EFFFVYTDKA SRKAFYEFLR FCLDIPFVKI VLSLREDYLH YLLELERLFN LGSINNNILD
KNIRYYLGNF TPADAKAIIQ NLTEKTHFYL EPKLIDKLVE DLSCQFGEVR PIELQIVGAQ
MQTEKINTLA KYCQFGTKEK LVERFLETVI RNCGSENEQM ARLVLYLLTD ENGTRPLKTR
TDLASDLKPE VKTLDLILEI FVKSGLVLLL PEVPADRYQL VHDYLVPFIR QQQGNELLAE
LEQEREQRKQ IEQELERVET ILTQVNAELE KQQIVLREVQ AGTTLEQEGV SALRQFDFAQ
LDSLMSAMRS GKALQALVKD GRSLAKYPAT SPLLALQTIL DNIQERNQFQ GHQGWVRSVS
FSPDGEYILT ASDDCTARLW NLQGKQLISL QGHEDTIWSA NFSPDGKYMA TASSDRTARL
WNFRGQQLAK IQGHQGYVRS VSFSSDGKYI ATSSDDRTAR LWNFSGQQLA QFSGHQGTVW
CVSFSPDGKH IATAADDRIV RLWNLKGKLL VRFPGHQDCV WDVSFSPDGQ YVATASSDGT
ARLWNLAGEQ ISRFRGHQDV VWSVRFSPNG KYIATASSDR TARVWNLNGQ QLEQFPGHQD
YVRSVSFSPD GKYIATASSD RTVRLWYLNK QQFPPFRGHQ STVRSIDFSP DGQQVVTASD
DRTVRLWSIQ GEELLQFLGH RGKVWSVSFS PDGKYIATTS SDRTVRLWDV TGQMLQQFPG
HQGTVWSVNF SPDGQHIATA SSDLTARLWS LDGQELMRFK GHDKWVRYVS FSCNGEHLAT
AADDCTARLW NLQGQQVGQF LGHQSTVWSV NFSPDCQYLV TASEDHTAKL WTLDGQILTE
FRGHQAPLKS AVFSHNGQYI ATSSDDRTVR LWNLNGQQIA QFKGHKGAVR SISISPDDQY
IATASDDRTV RLWPIENLDQ LLRRGCNWLQ DYLENNTHVT ESDRRLCEIL KY
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