Gene Ava_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2063 
Symbol 
ID3680712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2552934 
End bp2554313 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content35% 
IMG OID637717408 
Producthypothetical protein 
Protein accessionYP_322580 
Protein GI75908284 
COG category[S] Function unknown 
COG ID[COG4938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.731281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.359849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGT CTCATTCTAA GAATGGTAAT GAAAACGAAA CAGCTAAAGG AATAACAAGA 
ATTTCTGTCA GTGGTTATAA GTCACTTTAT GATGAATGCA GCATAGAAAT ACGTCCATTA
ACAATTCTTG CAGGTGCTAA TAGTTCGGGC AAGTCAAGCA TTATACAACC TTTATTGTTG
ATGAAACAAA CTCTAGAGGC AACTTATGAC CCTGGGGCTT TGTTACTTAA TGGAGCTAAT
GTCAAGTTTA CATCAGCAGA ACAATTAATC TCTCATCTAC CCGGTAAAGA ACGTATTCAG
AGGTTTGTAA TTGGTATAGA GATAGAACAT AATCAATCTG TTAAAAATAT CTTTACTAAG
TTCCCTAGAC AACCGATTGA CTTACAGGAA ATGATAGTTG AGAAAAATGA TAGTAAAGTT
TCACTGTCAA CTGATACATT ACCAGCAGAT GTAGTTAATA TTCTACCTAA GCAATATTTG
GATTTTTATA AATCAATTCA AGACACAGAC TTAAAAGGAA AATTCTTTTT TATAATTTCC
AGAAATCGTT GTTTTTTAGA GTTTGAATTA TATGATTTCA TAAATCAAAA AAAGCTTAGT
TCTCAAAGTT TTTTGTTTAA TTATATCACT CCCGATCATA CAGAATTATT TGGCAGACAA
ATAAGAAAAA TTATACATAT ACCGGGATTA CGCGGGAATC CAGAACGGAA CTATAAAACT
ACTGCTGTAG GTGATGCCTT TCCGGGTACA TTTGATAACT ATGTTGCTAG TATTATTCAT
CGCTGGCAAA GACCTAGAGA TAAACGTCTT CAAGAATTGA ATAATGCGCT TGTGTCTCTT
GGTCTAACTA GTAAAGTACA AGCTAAACAA CTTGATGATA CACAAGTAGA GCTTAGAGTT
GCTCGTCTTA CTAGAAATTC TGACAATGAA AAGGATATGG TCAGTATTGC TGATGTTGGC
TTTGGTGTGT CTCAGACTTT ACCAGTTTTA GTCGCCTTAC TTGTAGCAGA ACCAGGACAA
TTAGTTTATA TTGAACAACC AGAAATACAC TTACATCCCC GCGCTCAAGT TGCTATGGCA
GAAATTTTAG CTAACGCAGC AAAACGAGGT GTAAAAATAG TTGTAGAAAC ACATAGCGAC
AGATTAATTT TAGCAACTCA ATCTTTAGTT GCTGAAGGCA ATTTATCCCC AGATTTAGTT
AAATTACACT GGTTTACACG TCAAGAAGAT GGTATAACAA AAATCAATAG TGCTGACTTA
GATGAAACAG GTGCTTTTGG AGATTGGCCA GAAGATTTTG GTGACGTATC TCTACAATTA
GAAAACCGTT ATTTAAGTGC TGCGGAAGCT CGATTAATTC AAGGTACACA TGGCGGATAA
 
Protein sequence
MSSSHSKNGN ENETAKGITR ISVSGYKSLY DECSIEIRPL TILAGANSSG KSSIIQPLLL 
MKQTLEATYD PGALLLNGAN VKFTSAEQLI SHLPGKERIQ RFVIGIEIEH NQSVKNIFTK
FPRQPIDLQE MIVEKNDSKV SLSTDTLPAD VVNILPKQYL DFYKSIQDTD LKGKFFFIIS
RNRCFLEFEL YDFINQKKLS SQSFLFNYIT PDHTELFGRQ IRKIIHIPGL RGNPERNYKT
TAVGDAFPGT FDNYVASIIH RWQRPRDKRL QELNNALVSL GLTSKVQAKQ LDDTQVELRV
ARLTRNSDNE KDMVSIADVG FGVSQTLPVL VALLVAEPGQ LVYIEQPEIH LHPRAQVAMA
EILANAAKRG VKIVVETHSD RLILATQSLV AEGNLSPDLV KLHWFTRQED GITKINSADL
DETGAFGDWP EDFGDVSLQL ENRYLSAAEA RLIQGTHGG