| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2050 |
|---|
| Symbol | |
|---|
| ID | 3680699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2538362 |
|---|
| End bp | 2539681 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637717395 |
|---|
| Product | ABC transporter-like |
|---|
| Protein accession | YP_322567 |
|---|
| Protein GI | 75908271 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGTG ACAATACTGT GGCGCAAGTT GTTTTAGAAA ACGTTTACAA AAGTTTCCCT
CCCCGCAGAG GGGAAAATGT GAGTTCACAA ACTCCATCCG CGAAGAAAAC TGATGCAGAA
CCAGCAGGAA CCGTCAATGT TTTGCGACGG ATAAACCTGA CTATTCCTGA TGGGGAATTT
ATGGTGTTGG TGGGGCCTTC TGGTTGCGGT AAAAGTACCC TGCTACGGTT AATTGCGGGG
TTAGAAGTGA TGACAGGCGG TAATATTTGG GTAGGCGATC GCTTGGTGAA TGATTTACCA
CCCAAGGAAC GGGATATTGC AATGGTGTTT CAAAATTACG CCCTCTATCC CCACATGACG
GTATATGACA ACATCGCCTT TGGTTTGCGT CGTCGTTCTA GTTCTGAACA ACACAGAGAC
AATTCTCACC CCAGTTCCCA GACCCAATTC CCCACCTGGG CGGAAAATCT ACTAGTAGGT
GCGACAAGAA AGCTTCCCAA AGGACTGCGT TACATTTCCG ATCAAGAACG AGAAGTAGAC
GAGCAAGTAC GGTCTGTAGC GCATTTGTTA CAAATGGAAA CCTTGCTAAA TCGCTTACCC
AAACAACTAT CTGGAGGACA AAGACAGCGG GTGGCTTTAG GAAGAGCGAT CGCCCGTAAT
CCTCAAGTAT TCTTAATGGA TGAGCCGCTT TCTAACCTAG ATGCCAAGTT AAGGGCAGAA
ACCCGCGCTC AAATCGTCAA ATTGCAACGC CAGCTAGGCA CAACAACGAT TTACGTCACC
CACGACCAAA CAGAAGCCAT GACAATGGGC GATCGTATCG CCATCATGAA TCAAGGCCAA
ATTCAACAAG TAGCTTCCCC CCTAGAACTC TACAATCATC CGGCCAATCG CTTTGTAGCT
GAATTCATTG GTACACCACC CATGAATTTT ATTCCCGTAG AGTTCCACGC ACCATTGTTA
ATTACCCATT CCCAGTTCCG TCTCACCCTT CCAGAGATAT GGGCAAGTGC GTTGCAAAAA
TATGATGGGC AAACTCTCAT TTTAGGCATT CGTCCAGAAC ATTTAACTGT GAGTGTACCC
GCGACTAAAA ATTTGCCAGT ACAAGTAGAT TTAGTAGAAA ACTTAGGTAA TGATTCTTTT
ATTAATGTGG TACTAACTGA GGCTGAATCT CGATTTGCTC ATACAATTAA ACCTTTGCAA
GTACGAGTTC CATCAGACCG AATCATCAAT GTGGGAGAGC AAATCTGGTT ATCACTAACA
CTGGATAAAA TTCACTTTTT TGACCCTGAT ACTGATTTAG CAATATTTCC TAAAAATTAG
|
|---|
| Protein sequence | MTSDNTVAQV VLENVYKSFP PRRGENVSSQ TPSAKKTDAE PAGTVNVLRR INLTIPDGEF
MVLVGPSGCG KSTLLRLIAG LEVMTGGNIW VGDRLVNDLP PKERDIAMVF QNYALYPHMT
VYDNIAFGLR RRSSSEQHRD NSHPSSQTQF PTWAENLLVG ATRKLPKGLR YISDQEREVD
EQVRSVAHLL QMETLLNRLP KQLSGGQRQR VALGRAIARN PQVFLMDEPL SNLDAKLRAE
TRAQIVKLQR QLGTTTIYVT HDQTEAMTMG DRIAIMNQGQ IQQVASPLEL YNHPANRFVA
EFIGTPPMNF IPVEFHAPLL ITHSQFRLTL PEIWASALQK YDGQTLILGI RPEHLTVSVP
ATKNLPVQVD LVENLGNDSF INVVLTEAES RFAHTIKPLQ VRVPSDRIIN VGEQIWLSLT
LDKIHFFDPD TDLAIFPKN
|
|---|
| |