Gene Ava_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2038 
SymbolinfC 
ID3680979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2520574 
End bp2521107 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content48% 
IMG OID637717383 
Producttranslation initiation factor IF-3 
Protein accessionYP_322555 
Protein GI75908259 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.369536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGA TTGAGAAAAA AAGAACTCGC GATCTGCCCC AAATTAACGA ACGGATCCGC 
TTCCCGAAAA TTCGAGTCAT TGACACTGAT GGTTCCCAGC TAGGAATTCT AACTCCACAG
GAAGCGCTGC AACTAGCAGA GGAGAAGGAG CTGGATCTAG TGCTACTCAG TGACAAGGCC
GACCCGCCGG TGTGTCGGAT TATGGATTAC GGGAAATACA AGTTCGAGCA GGAGAAGAAG
GCGCGGGAAG CTCGAAAGAA ACAGCACACG GCTGATGTGA AAGAAGTGAA GATGCGCTAC
AAAATCGAGG AACACGACTA CAATGTCCGT GTTAAGCAAG CAGAACGCTT CTTGAAAGAT
GGTGATAAAG TCAAAGCAAC TGTGATGTTC CGGGGTCGAG AGATTCAACA CAGTGACCTG
GCAGAAGATT TACTGAAGCG AATGGCAACG GATCTGGAAC CGTTTGGTGA AGTGCAACAA
GCACCCAAAA AAGAAGGGCG AAACATGATG ATGCTCATCT CGCCTAAGAA GTAA
 
Protein sequence
MPVIEKKRTR DLPQINERIR FPKIRVIDTD GSQLGILTPQ EALQLAEEKE LDLVLLSDKA 
DPPVCRIMDY GKYKFEQEKK AREARKKQHT ADVKEVKMRY KIEEHDYNVR VKQAERFLKD
GDKVKATVMF RGREIQHSDL AEDLLKRMAT DLEPFGEVQQ APKKEGRNMM MLISPKK