Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2038 |
Symbol | infC |
ID | 3680979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2520574 |
End bp | 2521107 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637717383 |
Product | translation initiation factor IF-3 |
Protein accession | YP_322555 |
Protein GI | 75908259 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.369536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTGA TTGAGAAAAA AAGAACTCGC GATCTGCCCC AAATTAACGA ACGGATCCGC TTCCCGAAAA TTCGAGTCAT TGACACTGAT GGTTCCCAGC TAGGAATTCT AACTCCACAG GAAGCGCTGC AACTAGCAGA GGAGAAGGAG CTGGATCTAG TGCTACTCAG TGACAAGGCC GACCCGCCGG TGTGTCGGAT TATGGATTAC GGGAAATACA AGTTCGAGCA GGAGAAGAAG GCGCGGGAAG CTCGAAAGAA ACAGCACACG GCTGATGTGA AAGAAGTGAA GATGCGCTAC AAAATCGAGG AACACGACTA CAATGTCCGT GTTAAGCAAG CAGAACGCTT CTTGAAAGAT GGTGATAAAG TCAAAGCAAC TGTGATGTTC CGGGGTCGAG AGATTCAACA CAGTGACCTG GCAGAAGATT TACTGAAGCG AATGGCAACG GATCTGGAAC CGTTTGGTGA AGTGCAACAA GCACCCAAAA AAGAAGGGCG AAACATGATG ATGCTCATCT CGCCTAAGAA GTAA
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Protein sequence | MPVIEKKRTR DLPQINERIR FPKIRVIDTD GSQLGILTPQ EALQLAEEKE LDLVLLSDKA DPPVCRIMDY GKYKFEQEKK AREARKKQHT ADVKEVKMRY KIEEHDYNVR VKQAERFLKD GDKVKATVMF RGREIQHSDL AEDLLKRMAT DLEPFGEVQQ APKKEGRNMM MLISPKK
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