| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1998 |
|---|
| Symbol | |
|---|
| ID | 3681425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2481259 |
|---|
| End bp | 2482353 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637717340 |
|---|
| Product | DRTGG |
|---|
| Protein accession | YP_322515 |
|---|
| Protein GI | 75908219 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0857] BioD-like N-terminal domain of phosphotransacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.253796 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAAAT CTGCTAAATA TTTGCTGATT GGCTCGACTG AGACTTATAG CGGTAAGTCC
GCAACAGTTC TGGGATTGTC TCATCAGTTA CAGCAAAAAG GATTAGATAT TGCTTACGGC
AAACCATTAG GCAATAGTTT GAGTACATCT GAAGGTACTT TAGTTGAAGA AGATGTCCAG
TTTATTACCC ATAGTCTCAA TTTATCGGCA AATCGTATTG CTCCCACAAT ATTGGCTTTA
GATGAAGCCA GTATGCAGAA ACGTCTATTT GGTGAAGACA CAACTGATTA TAGTCAGACT
TTGGTGGAGC AGTATTTACA AGTTCCTCGT GGGGATTTAG TTGTGCTAGA AGGCCCTGGG
GATTTAGCAG AAGGTTATCT GTTTGATTTG TCTTTACTGC AAGTAGCAGA CGTTTTGGAT
GCGTCTGTAC TATTGGTGAG TCGTTACAGT TCGCTAATTT CTGTGGAATC GCTATTATCG
GCTAAACAAC GTGTAGGCGA TCGCTTGATT GGTGTTGTGA TCAATGATAT CCCGCCTGCC
CAGTTAGAAA CTGTTGAGAA TTTTGTCCGT CCTTATCTAG AACAGCAAGG TATTGCCGTA
ATGGCGATGC TGCCCAAAAA TGATTTACTC CGTAGTGTCA GCGTGGGTGA ATTGGTCAAA
CAACTCAACG CCGAAGTTCT CTGTCGTAGC GATCGCCTAG ATTTGATGGT CGAGAGTTTA
GCAATTGGGG CGATGAATGT AAATGCTGCG GTGAAGTATT TCCGCAAGCG TCGGAATATG
GCGGTAGTGA CAGGCGGCGA TCGCGTGGAA ATTCAGCAAG CAGCCTTAGA AACCTCTACT
CAATGCCTCA TCCTTACCGG ACAATTACCC CCTCCACAAT TTATCCTCAG TCGTGCTGAA
GAGTTAGAAA TTCCCATCTT ATCCGTTGAC TTAGATACCC TCACCACTGT AGAAATTGTT
GACCGCACCT TCGGCCAAGT GCGTGTCCAT GAGCCGATTA AAGTACAGTG TATTCGTCAG
TTAATGGCTG AAAATTTTGA TAGCGATCGC CTGTTATCTA AACTAGGTTT AACGCCCGCT
ACAGCCTTAC CTTAG
|
|---|
| Protein sequence | MPKSAKYLLI GSTETYSGKS ATVLGLSHQL QQKGLDIAYG KPLGNSLSTS EGTLVEEDVQ
FITHSLNLSA NRIAPTILAL DEASMQKRLF GEDTTDYSQT LVEQYLQVPR GDLVVLEGPG
DLAEGYLFDL SLLQVADVLD ASVLLVSRYS SLISVESLLS AKQRVGDRLI GVVINDIPPA
QLETVENFVR PYLEQQGIAV MAMLPKNDLL RSVSVGELVK QLNAEVLCRS DRLDLMVESL
AIGAMNVNAA VKYFRKRRNM AVVTGGDRVE IQQAALETST QCLILTGQLP PPQFILSRAE
ELEIPILSVD LDTLTTVEIV DRTFGQVRVH EPIKVQCIRQ LMAENFDSDR LLSKLGLTPA
TALP
|
|---|
| |