Gene Ava_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1982 
Symbol 
ID3681545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2462121 
End bp2463089 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content36% 
IMG OID637717323 
ProductTerpene synthase, metal-binding 
Protein accessionYP_322499 
Protein GI75908203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.150078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.785629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAT TTACTTTCCC AAATTTATAC TGCCCATTTC CCGAAAGGAA AAATCCGTAT 
TCTGAATTTC TACAAGACTA TGCACTTCAA TGGGTAATTC GCTTCAAACT AATTGATAGT
GAATCGTTAT ATCAACGTTT CTCGAAAGCT AAATTTTATT TACTCACAGC AGGCGCTTAT
CCTCATTGTC AACTGGAAGA ATTAAAAATT GCCAATGATG TAATAAGCTG GTTATTTATT
TGGGACGATC AATGTGATAT TTCAGACTTA GGAAAAAAAC CGGAGTTACT GAAAACTTGG
TGTAACAGAT TCCTAGAAAT ACTAAATGGA GCAGAACTTA CTCCCGATGA TCTACCCCTG
GGATTTGCAT TAAGAGATAT TAGAAATCGC ATCATTAATA GAGGAGGCAT AACATTTTTC
CATCATTTTG TACGTAACTT CGAGGATTAT TTTCACGGAT GTATTGAAGA AGCTCATAAC
CGCGTCAATG TATCAGTTCC TGATGTTGAG GCTTATATCA AAATCCGTAG CGCAAACGCA
GCAGCCGCTC TGTGTCTGAA CTTAATTGAA TTCTGTGACA GAGTAATGAT TCCTTATTCT
TTAAGAAATC ATGAGACTCT CAAAAAACTA ACTCAAATGA CGATTAATAT TCTTGCCTGG
TCGAATGATA TTTTCTCCGC TCCCAGAGAA ATAGCTAACG GTGAGGTACA TAATTTAGTT
TTTGTCATAC ACCATCATCA AAAAATTCCT CTAGAAAAAG CCATGTTAGC GGCTGCTGCA
ATGCACAATC ACGAGGTTCA GAAACTTGTA AATTTAGAAT CAAAAATTGC ATCTTTTAGT
GCAGAAACTG ATGCAGAGAT TACAAAGTAT ATATCTGGAT TACACGCATG GATACGTGGA
AATCTAGATT GGTATGCTCA TTCAGGGCGC TATCAAATAA CAGAGAAATT AGAATTACTT
GCTTCTTGA
 
Protein sequence
MEKFTFPNLY CPFPERKNPY SEFLQDYALQ WVIRFKLIDS ESLYQRFSKA KFYLLTAGAY 
PHCQLEELKI ANDVISWLFI WDDQCDISDL GKKPELLKTW CNRFLEILNG AELTPDDLPL
GFALRDIRNR IINRGGITFF HHFVRNFEDY FHGCIEEAHN RVNVSVPDVE AYIKIRSANA
AAALCLNLIE FCDRVMIPYS LRNHETLKKL TQMTINILAW SNDIFSAPRE IANGEVHNLV
FVIHHHQKIP LEKAMLAAAA MHNHEVQKLV NLESKIASFS AETDAEITKY ISGLHAWIRG
NLDWYAHSGR YQITEKLELL AS