| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1970 |
|---|
| Symbol | |
|---|
| ID | 3681533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 2445837 |
|---|
| End bp | 2446250 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637717311 |
|---|
| Product | peptidyl-tRNA hydrolase domain protein |
|---|
| Protein accession | YP_322487 |
|---|
| Protein GI | 75908191 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0828493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAA TTTCCCAGAA AATCATCATC CCCGATAGCG AAATTGAAAT TAGCGCCATT
CGCTCCCAAG GCGCGGGAGG GCAAAATGTC AATAAGGTTT CTACTGCTAT CCACCTACGC
TTCAACATAG AAGCTTCATC CTTACCAGCT TTCTATAAAG AGCAGCTTTT GAAGCTGAAT
GACCGACGCA TTAACCAAGA GGGAGTCGTT GTCATCAAGG CTCAAGAACA CCGTAGCCAA
GAGCAAAACA AAGAAGAAGC TCTGCAACGC CTCAAAGACC TCATCAAAAG CGCGGTCATA
CTACCCCAAC CACGCAAACC TACTAAACCA ACTCGCGGTT CTCAAAAAAG ACGACTTGAC
AGTAAAACTA AGCGAGCAGA GATTAAATCT ATGCGAAGGC AGGTTATTGA TTAG
|
|---|
| Protein sequence | MLQISQKIII PDSEIEISAI RSQGAGGQNV NKVSTAIHLR FNIEASSLPA FYKEQLLKLN
DRRINQEGVV VIKAQEHRSQ EQNKEEALQR LKDLIKSAVI LPQPRKPTKP TRGSQKRRLD
SKTKRAEIKS MRRQVID
|
|---|
| |