Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1962 |
Symbol | |
ID | 3681622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2438375 |
End bp | 2439010 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637717303 |
Product | thymidylate kinase |
Protein accession | YP_322479 |
Protein GI | 75908183 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0101939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.909912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGCA GATTCATTGT ATTTGAAGGG GTTGAAGGTT GCGGCAAAAC TAGCCAAATG CAGCTTTGTG CAGAGTGGTT GCAAAATTTG GGAATTTCTG TGATTCTCAC CCGTGAACCA GGAGGAACAG AATTAGGTGT AGATTTGCGG CGCTTGTTGT TACAGAAGGC GGAAGATAAG CCAATCGCTG AGGTGACAGA GTTATTATTA TATGCTGCCG ATCGCGCACA ACACGTTGCC CAAGAACTCA AACCTAAGTT AGCTCAGGGT AAGTATATAT TATGCGATCG CTATGTTGAC TCTACTATTG CCTACCAAGG TTACGGTCGC AATTTGGACA TGAATCTCAT CCATCAGTTA AATGACATCG CCACTGGTGG GTTAACCAGT GACATCACCA TCTGGCTAGA TGTGGATGTT GAAGTCGGAC TAGCCCGAAA ACGGGGGGAA AATGTAGGAC TAGACCGGAT TGAACAAGAA ACCATCGCTT TCCACCGCCG TGTACAGCAA GGCTATGCAA ACTTAGCTGC ATCCTCTCCC TCGCGCATCA TCAGGGTTGA TGGTCAATTG AGTAAAGAAA CTGTACATAA AACCATTCAG GAGATTCTCA GCCCACATCT AAAGGAATGG CTGTAG
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Protein sequence | MGGRFIVFEG VEGCGKTSQM QLCAEWLQNL GISVILTREP GGTELGVDLR RLLLQKAEDK PIAEVTELLL YAADRAQHVA QELKPKLAQG KYILCDRYVD STIAYQGYGR NLDMNLIHQL NDIATGGLTS DITIWLDVDV EVGLARKRGE NVGLDRIEQE TIAFHRRVQQ GYANLAASSP SRIIRVDGQL SKETVHKTIQ EILSPHLKEW L
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