Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1931 |
Symbol | |
ID | 3681650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2398960 |
End bp | 2400780 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637717272 |
Product | S-layer region-like |
Protein accession | YP_322448 |
Protein GI | 75908152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.575111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATA AAATAAACTT ATTACTACTA TCTGGGACAG TATTATTAGG GCTAAATGTT CCAGTTTTGG CGGAAGATAT ACTCAAAAAT CAATGGCGAT CGCCGGATAA ATCTGATGTT GAAAAATTAT CCTTTGAAAT TATTAGCGAA GATGCTCAAT ATTTAGCTGA ACAAGTTCCT ATTAATCCAT CTGACTTTTC ACTGGATCTG GAAAACCCCT CTCCAAACCT CTCCCCTAAA AGGAGAGAGG CTTTGAATTT TCCCACTTCC CTTGTAGGGA AGGGGGTTAG GGGGTTAGGT TTCACATTAA ATTTTCCACA TAATGTGAAA AGTCAGATTA ATCCAGATAT TTACTCTCAA ACATCGCCTG AACAAAATAT GGCACAGGTG ACATCAGTAT CACAATTATC TGATGTACAA CCAAGTGATT GGGCTTTTGC TGCCTTGCAA TCCTTAATAG AACGTTATGG AGTGATAGCA GGTTATCCTG ATGGTACATT TAAAGGCGAT CGCACCATTA CACGTTACGA ATTTGCGGCT GGATTAAATG CTGCTTTAGA TAAAATCAAT CAATTAATTG CATCTGGCTT AACAGATAAA GTCACCGACG CTGATTTAGA AACATTACGA AAACTCCAAG AAGAATTTGC TACAGAATTA GCCATTTCTA GAGGTAGAGT TGATGCTTTA GAAGCCCGTA GTGCTGATAT TCAAGCTCAA CAGTTTTCCC CTAACGTAGT ATTAGGAGGA CAAACTATTT TCGGGCTAGC TGGTGGTTTT GGGGGGAATC GTCCAGGTGA TGGAGAAGCC AACACAATTT TTACTTACCT GACACAATTA CAACTAGCTT CCTCCTTTAC AGGAAAAGAC CGTTTTCGCG TCGGGCTAAT ATCAGGAAAC GCCGCTAATA ATAGCTTTGA AAACCTCCAA GCCTTCAATA CCAACATGGC AAGATTAGCT TGGCAAGGAA ATTACGACAA TCAAGTTAGT ATAAACTCTG TTGAATATCG AGTTGCAGGT TTAGGCGATC GCGTTGTTTT CACCTTTAAA CCTGTAGGAT TTAGCTTAGG CAGTGTACTT AGTCCTAACT CTATCTATGC AGATGCAGGA CAAGGAGCAA TATCTGCATT TGCAGGTTCA ACACCTATCT TGAGAATTGG TAACTTAGAT GCTGGTTTAG GCTTTGACTG GTTACTTTCA GACGAAATCC GTTTGCAATT CGCCTATGGT ACAAGAGGTA GCAGCGACAG CAACCAAGGT TTATTTGGTG CAGATCACAG CGCCTTAGGA TTACAGTTTT TATACAAGCC AACCCCCTCA CTTATTACAG GTTTAGCTTA TATCAACGCT TATTCCAGCG ATGGTCACTT AGATACGGGT ACTGGTAGCA GTAACGCCGA TACCTCAGGG GGAATTAACG AACCTTCACA AATCCACGCC CTCAACGCTA GCATGAGATG GCAATTAACT AATAAGCTAG TTCTTGGTGC TTGGGGTGGT GTCATGGTGA CAGATTCTCT CAAATCAGAT GCAGTTGTTC TCAGCAGCAC CTATACAGTT TCTTTAGGTA TATATGACCC CTTTGGCAGA AAAGGGGATT TATTTGGTTT TCTCTACGGC TTACCACCAA AATTAAACAA CGGCGTATTA ATACCCACCG CAGATACTGG CAATTCCACT CACTACGAAG TTTTTTACCG CTATTTAGTC AACGACAACA TCGCCATTAC CCCTGGCTTT TTTCTCGTCA CCGACCCTGG TCATATTTCC AGCAACAATG ATATTTTCAT CGGTGCTATC CGTACCACCT TTAATTTTTA A
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Protein sequence | MQNKINLLLL SGTVLLGLNV PVLAEDILKN QWRSPDKSDV EKLSFEIISE DAQYLAEQVP INPSDFSLDL ENPSPNLSPK RREALNFPTS LVGKGVRGLG FTLNFPHNVK SQINPDIYSQ TSPEQNMAQV TSVSQLSDVQ PSDWAFAALQ SLIERYGVIA GYPDGTFKGD RTITRYEFAA GLNAALDKIN QLIASGLTDK VTDADLETLR KLQEEFATEL AISRGRVDAL EARSADIQAQ QFSPNVVLGG QTIFGLAGGF GGNRPGDGEA NTIFTYLTQL QLASSFTGKD RFRVGLISGN AANNSFENLQ AFNTNMARLA WQGNYDNQVS INSVEYRVAG LGDRVVFTFK PVGFSLGSVL SPNSIYADAG QGAISAFAGS TPILRIGNLD AGLGFDWLLS DEIRLQFAYG TRGSSDSNQG LFGADHSALG LQFLYKPTPS LITGLAYINA YSSDGHLDTG TGSSNADTSG GINEPSQIHA LNASMRWQLT NKLVLGAWGG VMVTDSLKSD AVVLSSTYTV SLGIYDPFGR KGDLFGFLYG LPPKLNNGVL IPTADTGNST HYEVFYRYLV NDNIAITPGF FLVTDPGHIS SNNDIFIGAI RTTFNF
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