Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1880 |
Symbol | |
ID | 3681793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2332165 |
End bp | 2332818 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637717221 |
Product | hypothetical protein |
Protein accession | YP_322397 |
Protein GI | 75908101 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.57305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAATAA CACAGCCACC GGCAGAAACA AGAACTTTGC TCAAAAACAT TAGTTGGCAG ACCTTCAAGG CAATTCTGGC AGATATGGGA AATGAACGAA ATTCTAGGTT TGCCTATGAC AGAGGAATAG TGGAAATCAT GACTCCACTC ATGCCGCATG AGAACTTTAA TCGCCTGATA GAAGGCTTTA TTATCGTGCT GTGTGAAGAA TTTAGTTTAG AAGTAAAAAG TACAGGCTCA CTTACATTAA CACGAGACGA TTTAGAAAAA GGCGGAGAGC CAGATAGTAG TTATTATATT CAGAATGAAT TTTTAATTAG AGATAAAGAA AATATTGATT TAGCTCACGA TCCACCACCA GATTTAGTAC TAGAAGTAGA TTATTCTAGA CCTAAAATTA ATAAATTATC TCTTTATGCC TCAATGGCTA TTCCTCAGTT TTGGAAATAC AACGGAACTG TATTACAAAT TTATAGTCTT TCAGGTAATG AGTATATAGA AGTTGAGTTT AGTCCCACTT TTGTGCCAGT TTCTGTAAAA GATATTCCCC GATTTATACA AGAAAGTAAA AAAATAGGTC AGCTTGCAGC AAAAAGCGCT TTTCGCACTT GGGTAAGACA GCAAATCTCT GCGGCTCAAC CACCCGTACT TTAA
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Protein sequence | MVITQPPAET RTLLKNISWQ TFKAILADMG NERNSRFAYD RGIVEIMTPL MPHENFNRLI EGFIIVLCEE FSLEVKSTGS LTLTRDDLEK GGEPDSSYYI QNEFLIRDKE NIDLAHDPPP DLVLEVDYSR PKINKLSLYA SMAIPQFWKY NGTVLQIYSL SGNEYIEVEF SPTFVPVSVK DIPRFIQESK KIGQLAAKSA FRTWVRQQIS AAQPPVL
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