Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1867 |
Symbol | infB |
ID | 3681819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2317996 |
End bp | 2321112 |
Gene Length | 3117 bp |
Protein Length | 1038 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637717208 |
Product | translation initiation factor IF-2 |
Protein accession | YP_322384 |
Protein GI | 75908088 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACG GCAAAGTTAG AATCTACGAA TTATCAAAGG AATTGAATTT GGATAACAAA GAGCTACTAG CAATTTGCGA CCAGCTCAAT ATTGCGGTCA AAAGCCATAG CAGTACAATC TCAGAATCAG AGGCAGAAAG TATCCGGGCA GCTGCGGAAA AGCTTGCAGC TACAAATGGA ACATCTAAAA AAGAATTAAA CACAACCAGT CATAAACCAA ATTCAGCACC TGCTGGCTCG CGCAACCGAC CTGCGCCCCC ACAAAAACAA CAACAAATTT TGGAAATTCG TAAACCCAAA ATATTGAGAA ACACTACCTC CAACGCTCCA GAAGCGTCAG TTGCTAATAA CCAGATTGCT TCTTCTGAAG CCAATTCTCC AGCACCTCCA CGGCCCTTCG CTACACCAGT CTCGCCCATG AAGCCGACGG CACCATCTCG ACCTGTACCA CGGAATCTAT CTGAGACCCC GCAAAAACCT GCTGCACCAG AAGCAGAACC GGAAGCTCAA TCACAAGCTC CGGCGAAAAT CGCAGTAGAG AAGCCAGAAA AATCAGCTCA GCCCAGACCA GGTAAACCAG AGAGACAACC AAAACCCCAA CTGGTAGCGC CTCCTAGTAG ACCTACAGCA GAAAAACTGG ATCTATCTGA AATAACAGGT GCGCCAGGCG AAAAACCAAT TCTCAAACGC GATCGCCCAC GGCGTGAAGA TGAGCGCGAC CAAGCTAAAC CAAGAGTCGC CAAACCTGCA CAAGGAGAAA CCTCATCGGC TCCAGTACAA AAACAGGCTC GCCCTGCCCA AGGCCCCGTC AAACCAGAGC AACGTGTCAA TAGACCAGGC GCTCCATCAG GTGACGGCAT ACGTCCTCAA AGACCAGTGC GCCCGTCAGT AGATGCCGCA CCAGTTGCCA CTCCACCTAG AGGAGTTCCC GGTGGTAGAG GAGAGGTAGG CGATACAGCT GCGATCGCCC CAGACCTGCT AGATTTGAAA CGCCCGACAC CACCCCGTCT CGCCAAAGGT GGCAAGAAGT GGCAAGAAGA AGAAATCATT GACGAAATCA AAGAAAAAGC TGGCAAGGCT GGCGTTAAAG GCAAACGCGT CAAGCCATTG GTAGAAGATG ATTTTGAAGA CGAAGACTTA CTAGATGAAG AGGGATTAGA AATACCCGCA ACCGTCCAAG TTAGTCTTTC CATCGCTCGT CCCCCCAAAC CCAAAGCAGC CAGAGCAGCG ACAGCAGCGA CAGCAGCACC AATTAGTAGT CCCACAACTC GTGGTAAGAG GTCTAGCCAT AACAACCGTG ACCAAAACCG CCGCCAGGAA ACAGAAGTTA AACGTGAGCG GCCAGAGAAA GTTGCGGTCA CCGGGCCAAT GACAGTGCAA GAGTTAGCCG ACCTTCTGGC AGTTGCTGAC ACAGAAATTG TGAAAATCCT GTTCATGAAA GGCATGGCAG TGAGTATCAC CCAAAATCTG GATATCCCGA CAATTACCTT GGTGGGTAAA GAGTTAGAGA TAGAAGTCGA AACTGCTGAA CCAGAAGCAG AAGCCCGTAA AGTCACGGAA ATGATTGAAG TTGGCGACTT GGAACATCTC CTGCGTCGTC CGCCAGTAGT GACAATCATG GGTCACGTAG ACCACGGTAA GACTACCCTT CTCGACTCGA TTCGCAAAAC CAAAGTAGCA GCCGGTGAAG CAGGCGGGAT CACCCAGCAT ATAGGTGCAT ACCACGTTGA TATCGTCCAT GACGGTAAAG AACAGCAGAT TGTCTTCTTA GATACCCCCG GTCACGAAGC CTTTACAGCC ATGCGAGCAA GAGGCGCTAG GGTAACAGAT ATCGCTGTCT TAGTGGTAGC CGCAGACGAT GGTGTACGTC CCCAAACAGT CGAGGCAATT AGCCACGCTC AAGCAGCCGG AGTACCAATT GTTGTTGCTA TCAACAAGAT TGATAAAGAA GGCGCACAAC CAGACCGGGT GAAACAAGAA CTCACCCAGT ATGGCTTGAC CCCAGAAGAG TGGGGTGGTG AAACCATTAT GGTTCCTGTC AGCGCCATCA AGGGTGAAAA CCTGGATACT CTCCTAGAGA TGATTCTCTT AGTAGCAGAA GTTGGTGAAC TTTCTGCCAA CCCAGACCGG AACGCCAGAG GAACCGTTAT TGAAGCCCAC CTGGATAAAG CCAAGGGCGC AGTTGCTACC CTGTTGATTC AGAACGGTAC ACTCCATGTA GGAGATATAC TGCTTGCTGG TTCAGCATTT GGTAAAGTCC GGGCAATGGT TGATGATCGC GGCAGAAGAG TTGATATAGC TGGGCCTTCA TTTGCAGTTG AGGTACTCGG TTTAAGTGAC GTACCCGCCG CAGGTGACGA GTTTGAGGTA TTCGACAACG AAAAAGAAGC CAGAGCGCTG GCATCAGATC GTGCCGACAA GCAACGTCTC TCTCGTCTAC TACAAGGACG TGTCACCCTC ACAACCCTAT CCGCTCAAGC TCAAGAAGGC GAGTTGAAAG AACTCAACCT CATCTTGAAG GGTGACGTAC AAGGTTCTGT AGAAGCGATT GTGGGATCAC TCAAACAAAT CCCCCAAAAC GAAGTACAGA TTCGGATGCT GTTAACTGCG GCTGGCGAAA TCACCGAAAC AGATATCGAC TTAGCAGCAG CCAGTGGAGC TGTAATTATC GGCTTCAACA CCACCTTTGC CAGTGGAGCC AGACAAGCGG CTGATGAAGC AGGTGTAGAC GTACGAGAAT ACAACATCAT CTACAAACTG ATCGAAGATA TCCAAGGCGC ATTGGAAGGT CTGTTAGAAC CAGAGTTGGT TGAAGAACCC CTGGGTCAAA CCGAAGTCCG CGCTGTCTTC CCAGTTGGTC GCGGTGCTGT TGCTGGTTGT TATGTCCAAT CTGGCAAACT AGTCCGCAAC TGCAAAGTGC GGGTACGTCG TGCCGGTAAG GTGATCTATG AAGGCGTGCT TGACTCCCTC AAACGGATGA AAGACGACGC GCGCGAGGTC AACGCCGGTT ACGAATGTGG TATCGGTGTT GATAAATTCC ATGATTGGGC TGAAGGCGAC ATCATCGAAT CCTATCAAAT GGTCACAAAA CGCCGTACCC TAGCACTAAC AAGATAG
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Protein sequence | MNNGKVRIYE LSKELNLDNK ELLAICDQLN IAVKSHSSTI SESEAESIRA AAEKLAATNG TSKKELNTTS HKPNSAPAGS RNRPAPPQKQ QQILEIRKPK ILRNTTSNAP EASVANNQIA SSEANSPAPP RPFATPVSPM KPTAPSRPVP RNLSETPQKP AAPEAEPEAQ SQAPAKIAVE KPEKSAQPRP GKPERQPKPQ LVAPPSRPTA EKLDLSEITG APGEKPILKR DRPRREDERD QAKPRVAKPA QGETSSAPVQ KQARPAQGPV KPEQRVNRPG APSGDGIRPQ RPVRPSVDAA PVATPPRGVP GGRGEVGDTA AIAPDLLDLK RPTPPRLAKG GKKWQEEEII DEIKEKAGKA GVKGKRVKPL VEDDFEDEDL LDEEGLEIPA TVQVSLSIAR PPKPKAARAA TAATAAPISS PTTRGKRSSH NNRDQNRRQE TEVKRERPEK VAVTGPMTVQ ELADLLAVAD TEIVKILFMK GMAVSITQNL DIPTITLVGK ELEIEVETAE PEAEARKVTE MIEVGDLEHL LRRPPVVTIM GHVDHGKTTL LDSIRKTKVA AGEAGGITQH IGAYHVDIVH DGKEQQIVFL DTPGHEAFTA MRARGARVTD IAVLVVAADD GVRPQTVEAI SHAQAAGVPI VVAINKIDKE GAQPDRVKQE LTQYGLTPEE WGGETIMVPV SAIKGENLDT LLEMILLVAE VGELSANPDR NARGTVIEAH LDKAKGAVAT LLIQNGTLHV GDILLAGSAF GKVRAMVDDR GRRVDIAGPS FAVEVLGLSD VPAAGDEFEV FDNEKEARAL ASDRADKQRL SRLLQGRVTL TTLSAQAQEG ELKELNLILK GDVQGSVEAI VGSLKQIPQN EVQIRMLLTA AGEITETDID LAAASGAVII GFNTTFASGA RQAADEAGVD VREYNIIYKL IEDIQGALEG LLEPELVEEP LGQTEVRAVF PVGRGAVAGC YVQSGKLVRN CKVRVRRAGK VIYEGVLDSL KRMKDDAREV NAGYECGIGV DKFHDWAEGD IIESYQMVTK RRTLALTR
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