Gene Ava_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1831 
Symbol 
ID3681939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2277617 
End bp2278285 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content39% 
IMG OID637717171 
Producthypothetical protein 
Protein accessionYP_322348 
Protein GI75908052 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACA GCCTTAAAGA ACTAATTGAT GAGCCAGAGT TGGGTCATAA TGACGACCCA 
GAGGAACGCT TTATCAGCAG TGGAGTGAGT TGGGAAAACT ATGAATCCCT ACTAGCCAAA
CTAGAAAACA ACTCTCATTA CCGTGTTACT TACTTAGATG AAATATTAGA GATAGTGTCG
CCATCAATCA GACATGAAAA AATCAAAACG AATTTAGGGA TGCTATTAGA GCGTTTCTTT
TACAGCAAGC GCCTTCGTTT TGTACCTCTG GGAAGTTCTA CTTTTAAAAA CAAAGCCAAA
AAAGTAGGTG TAGAACCAGA TGAGTCTTAC TGCATAGGTG AAGAGAAAAA AGTACCCGAC
TTAGCCATAG AGGTAGTTGT TACTAGTGGC AGTATAAATA AACTAGAAAT TTACCGAAGA
CTGGGAGTTA CAGAAGTCTG GTTTTGGGAG AAAAACCAGT TTAAGTTGTA CCATCTACGG
AACAATTCCG ACAACGAGCA AGCCACTGTT TACCCTGAAA CTTATGGGTA TGAACTGATA
GTCACCAGTG AAATACTGCC AGAATTAGAC ATTTCTTTAT TAGAGCAATG CCTTTCAATT
TCAGATTCAA TTCAAGCTGT TGATGAATTT GAGCAGGGTT TGAAAGCAGC CGAAGAACGA
AACAAATAA
 
Protein sequence
MVNSLKELID EPELGHNDDP EERFISSGVS WENYESLLAK LENNSHYRVT YLDEILEIVS 
PSIRHEKIKT NLGMLLERFF YSKRLRFVPL GSSTFKNKAK KVGVEPDESY CIGEEKKVPD
LAIEVVVTSG SINKLEIYRR LGVTEVWFWE KNQFKLYHLR NNSDNEQATV YPETYGYELI
VTSEILPELD ISLLEQCLSI SDSIQAVDEF EQGLKAAEER NK