Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1826 |
Symbol | |
ID | 3681934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2272276 |
End bp | 2273649 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637717166 |
Product | cysteine desulphurase-like protein |
Protein accession | YP_322343 |
Protein GI | 75908047 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCTT TAGACTTGAA ATGGATACGT GGGCAGTTTC CGGCGCTTAC ACAAAAAATT AACGGACAAC CAGCTATATT TTTTGATGGC CCCGGTGGTA CACAAGTACC TGGGTCTGTT TTAGATGCTA TCAGTGACTA TTTAGTTAGG TCAAATGCTA ATGCTCACGG GGCTTTTGCT ACTAGCGCGC GGACGGATGC TTTAATTATT GCAGCAAGAA CGGCGATCGC TGATTTTTTG GGTTGTCACA GTGATGAGGT GGTGTTCGGC GCTAATATGA CGACGCTCAC CTTTAGTTTG AGTCGCGCTA TTGGACGGAC GCTGCAACCA GGTGATGAAA TTATTGTGAC ACGGCTTGAC CATTCGGCTA ATGTTTCCTC TTGGGAAGCA TTGGCAGAAC AAGGTGCAGT TATTCGTTAT GTGGATGTCA AAGTTGATGA TTGCACCTTA GATATGAATG ATTTGGAGCA GCAAATCAAT TCCCGCACCA AGTTAGTAGC CGTCACTTAT GCTTCCAATG CTGTGGGGAC AATTAACGAT ATTGCCGCTA TTGTCAAATT AGCCCATGCT GTAGGCGCTT TGGTGTTTGT CGATGCAGTT CATTATGCCC CTCATGGAAC GATAAATGTT CATGCTTTGG GGTGTGATTT TCTCGCCTGT TCTGCATACA AATTCTTCGG CCCCCACGTT GGGATTTTGT ATGGTAAGCG GGAACATCTT ACCAATCTGC AACCTTATAA AGTCAAACCA GCACCCAATG AAGTCCCATC CCGTTGGGAA ACCGGAACCT TGAATCATGA AGGATTAGCG GGTTTAGTCG CGGCTATTAA CTATTTGGCA AAATTAGGTT GTCATGTCTC CCCGAAAATT AACCAAGAGT TAGTTTCGGC GTTGATTGAG GCTGATAAGG AAGGTTTGGA ACATTTCCAA TGTCCCCGGT TTCTAACTTC ACCAGAACAA CCATCATCCA CATTGGCATC AGCTTATCAC AGTCGTCGGG CAGCTTTAGT TGCAGCCATG TCAGCGATTC AGCAATACGA AAGAGAATTG AGCCATAAAC TAATTTCCGG GTTGCTAGAA ATTCCTGGCT TAACTATATA TGGCATCACA GATCCAGAAC GCTTTGCTTG GCGGACACCA ACGGTAGCAA TTCGACTCCA AGGTAAAAGC CCAGAAAGCA TTGCGAGGAC ATTAGGCGAT CGCGGTATTT TCTCCTGGCA TGGTAACTTC TATGCCTTGA ATCTGACTGA GAAACTAGGT ATAGAAAATG ATGGCGGTTT ATTGCGCCTG GGGTTGGTAC ACTACAATTC TGTGGAAGAG ATTATACAAT TACTGCAAGC TTTAAAAGAA ATTGGCAGTG CCATATCGCT TTAA
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Protein sequence | MEALDLKWIR GQFPALTQKI NGQPAIFFDG PGGTQVPGSV LDAISDYLVR SNANAHGAFA TSARTDALII AARTAIADFL GCHSDEVVFG ANMTTLTFSL SRAIGRTLQP GDEIIVTRLD HSANVSSWEA LAEQGAVIRY VDVKVDDCTL DMNDLEQQIN SRTKLVAVTY ASNAVGTIND IAAIVKLAHA VGALVFVDAV HYAPHGTINV HALGCDFLAC SAYKFFGPHV GILYGKREHL TNLQPYKVKP APNEVPSRWE TGTLNHEGLA GLVAAINYLA KLGCHVSPKI NQELVSALIE ADKEGLEHFQ CPRFLTSPEQ PSSTLASAYH SRRAALVAAM SAIQQYEREL SHKLISGLLE IPGLTIYGIT DPERFAWRTP TVAIRLQGKS PESIARTLGD RGIFSWHGNF YALNLTEKLG IENDGGLLRL GLVHYNSVEE IIQLLQALKE IGSAISL
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