Gene Ava_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1769 
Symbol 
ID3682112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2204397 
End bp2206679 
Gene Length2283 bp 
Protein Length760 aa 
Translation table11 
GC content44% 
IMG OID637717109 
Producthypothetical protein 
Protein accessionYP_322286 
Protein GI75907990 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.7019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGTT GCCTTGAATC AAAAAATTCC CCATTAAGCA TCAATTTTGA GCCAGTAATG 
CCAATTGAAT TCCAACCCCA AAGCATTCGA GTTAACACTT GGTTAACTAA GTTATTATCC
ATACCCAAAA AATTGCTTTT TGTTCTTCAA GGTTGGCGGT CAATTAAGCG ACTTTTTCCA
GTCTTGTTTG CACTGTCATT TACTACAGTA CTATTACTAC AAAACCTCAC GCCAGCAACG
GCGCAAATAT CCCCATCACC ACGACAAGAA ATTCGGGGAG TTTGGCTAAC AAATAATGAC
TTTGACATAC TCAGAAATCG CGCTAAAGTG CAGGACACAC TGACTCAATT GCGGCGGTTG
AATTTTAATA CAATTTATCC CGTTGTTTGG AACGATGGCT ATACCAAGTA TCCCAGTGCT
GTCACCCAAC GGATGGGCAT CCCTTATTTC TTTCGAGGCA CAGAAGGGCA AGACGTAATT
GCAGACATTA TTAGTCAAGC TCGTAGTCAA GGCTTACTAG CTATACCTTG GTTCGAGTTT
GGTTTTATGG CTCCCTTAAC TTCCGAACTA GCATCCCAGC ATCCAGATTG GCTGACACAA
AAGCAGGATG GAACCCAAAC CTCAATTTCT GCGGCGGGTG AAGTAGCCTG GCTGAATCCC
TTCCACCCAG AAGTACAGCA GTTTATTACT GACCTGGTAG TAGAAATCAT TACCAAATAC
AACGCTGATG GGATTCAATT TGATGACCAC ATGAGTTTAC CCGTTGATTT TGGCTATGAC
AAATACACAA TTAATCTCTA CAGACAGGAA ACTGGGAATC CGCCGCCGCC TAATCCTCAA
GCCCAAGCAT GGATAAAATG GCGGGCAGAT AAAATCACCG CTTTCATGGT GCAACTCAAT
CAAGCTGTGA AAGCCAGAAA ACCCAATGCC ATTTTTGCCG TTTCGCCCAA TTACTATGAC
TTTGCATACA AGTTGCAATT ACAAGATTGG CTCAACTGGG TCAGGTTAGG TGTTGTAGAT
GAGTTAGTAG TCCAGGTTTA CCGGAATGAT TTGCAAAGTT TTAATAGTAA ACTCATCACT
CCAGAAATTC TCGAAACACA ACAGTTAATA CCTACTGGTA TAGGTATTAT GACTGGCTTG
AGAAATCGCC AAGTTTCCAT GTCACAAATT CAGTCGCAAG TCAGGGCGGC TCAAGAACGT
GGCTTAGGAG CGGTCTTTTT CTACTACGAA AGCCTTTGGG ACTATGCACC AGAGCCAGTG
GCGCAACGAC AGGCTGCTTT TCAACAACTG TTTCCCAATC CGGCTAGGCG TGATACTTCT
CAAATCACAG CCCGAAAACC GAGTTTTAAT ACTATCTCAG TTCCCTTATA TACAAAAGGT
TCTGTTGGGC AACGAGAGCG GGGTTATTTT CTCGAAGTAG CAGTGGCTGG TGGTCAGCCA
AGGCGTGTTC TGATGGATAC AGGCTCTGGG GGGCTGAGAG TGCCTAGAGA GTTTTTAGGC
AATGCCCCTA TCAATAGAAC TGGTCAGATA GTCAGAGAGG TGCTAAACGA TGGCACTATC
CTCGAAGGAG AGTTAGTTTA CACAAGTATG CGTATGGGGT TAATTGCCAC TGAAGAACCT
GTGCCGGTGC AAATCGTCAC CAGTCGCCAA TGTGTAGCCC AAAAACCTAA TTGCTCTGCC
AGGGGTAACA CACCGTTCTC TGGTATTATC GGTGTCAACT ATGCAGAACG CTCACTGCCT
TACAATCCTT TGAGAAAACT ACCAGGGAAT TTAAGTAACG GATTTATTAT TGCAGGCGAT
CGCACTAGTG GTAACAGTAG CCTCATCCTG GGTTTAACAG CACAGAATCG GGGAGGATTT
AATCTAGCTT CCCTGACTCA ACAACCCGCA ATGAATAGTA TTCCAGGAAA TAGATGGGAC
TCTAGGCTCA ATGGAGTTTG TTTAACTATT TCTGGCAGTG CCATGAAAAA TACCTGTAAT
GCCAAAATGC TAGCGGATAC TGGCGTAATC AGTAGTTTTA TTGACTTTAA GTCTGCTTCC
CTCATGGGTA AACTCAAACC CGGCAGGTTA AGCCCAAACA ACACGCTCAA GTTATCCATT
CCCCGCATAC TTGACTACAG CCTCGCCCCA GGCAATCGCA ACGGGTTTAA TGTATGGAAT
CTCAATGTTT CACCACAGCT AGATCAAGCT ATGGTTGTGA ATAGTGGCAT AGCACTGTTC
GACCGATACA ATGTACTTTT TGACCCAGTG AATGGACAAG AAGGTTTCCG TCTTCGCAGT
TAA
 
Protein sequence
MDCCLESKNS PLSINFEPVM PIEFQPQSIR VNTWLTKLLS IPKKLLFVLQ GWRSIKRLFP 
VLFALSFTTV LLLQNLTPAT AQISPSPRQE IRGVWLTNND FDILRNRAKV QDTLTQLRRL
NFNTIYPVVW NDGYTKYPSA VTQRMGIPYF FRGTEGQDVI ADIISQARSQ GLLAIPWFEF
GFMAPLTSEL ASQHPDWLTQ KQDGTQTSIS AAGEVAWLNP FHPEVQQFIT DLVVEIITKY
NADGIQFDDH MSLPVDFGYD KYTINLYRQE TGNPPPPNPQ AQAWIKWRAD KITAFMVQLN
QAVKARKPNA IFAVSPNYYD FAYKLQLQDW LNWVRLGVVD ELVVQVYRND LQSFNSKLIT
PEILETQQLI PTGIGIMTGL RNRQVSMSQI QSQVRAAQER GLGAVFFYYE SLWDYAPEPV
AQRQAAFQQL FPNPARRDTS QITARKPSFN TISVPLYTKG SVGQRERGYF LEVAVAGGQP
RRVLMDTGSG GLRVPREFLG NAPINRTGQI VREVLNDGTI LEGELVYTSM RMGLIATEEP
VPVQIVTSRQ CVAQKPNCSA RGNTPFSGII GVNYAERSLP YNPLRKLPGN LSNGFIIAGD
RTSGNSSLIL GLTAQNRGGF NLASLTQQPA MNSIPGNRWD SRLNGVCLTI SGSAMKNTCN
AKMLADTGVI SSFIDFKSAS LMGKLKPGRL SPNNTLKLSI PRILDYSLAP GNRNGFNVWN
LNVSPQLDQA MVVNSGIALF DRYNVLFDPV NGQEGFRLRS