| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1716 |
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| Symbol | |
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| ID | 3682137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2152803 |
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| End bp | 2154689 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637717056 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_322233 |
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| Protein GI | 75907937 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.805197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAG GCTTAGGGTT AGGGGTGGTA GGAATTACGA AAGCTGATAT AGAAGGTAAA
ACCATTTGGG AAGCACTCCC CCCAGAAACT TCTTCTGAGG TTGAGTTACC TTATCGCCAA
GCATTTGCCG GGATCAGCTC TCGTTTTGAA GCACCCTATG GACACCGCGT TTATGAAGTC
CATGTTTTAC CTGTGAGGAA CGATGATGGT GAGATTTTTG CTGGAATGAC CATTACCCAA
GAAATCACAG AGCGTAAACA ATCTGAATTA GCTTTGCAAG ATGCCCTACA ACTGTTAAAT
CTACACATAG ATACTACTCC TTTGGCAGTG GTGCAATGGG ATTGCCACCT ATGCGTTACC
CGTTGGTCAT CTACTGCCGA AAAAATCTTT GGCTGGCGGA CAGAGGAAGT AATCGGAAAA
TACTTTCAAG ATTTGCACAT GGTCTATGAG GAAGATATGA CAGCAGTTGC AGAGGCGAGC
AATCGCCTCC TCAGTGGCCA AGAATCGCAA ATTATCCAAT ACAATCGCAA CTATACTAAA
GACTCTAGAG TTATTTATTG CGAGTGGTAC AACTCTAGCA TTACTAATGA AGCAGGTAGT
GTCACCTCTG TACTGTCACT AGTATTAGAT GTAACAGAGC GCATACAAGC AGAAAAAGCA
TTACGCCAAA GCGAATTAAT GGTAATTGAA GAGCGGGCGC AAGCTTTAGA AAGAGAACGG
GCAGCTCGTA TAGAACTGGA AAGAGCCAGT CGCATGAAAG ATGAATTTTT AGCGATAGTT
TCCCATGAAT TGCGATCGCC CCTCAATGGT ATTTTAGGTT GGTCGCGCCT GCTCCGCACC
CGCAAACTGT CACCAGAAAA GATTGAACAA GCTTTAGAAT CAATTGAGCG CAATGCTCAA
GCCCAAACTC AATTAATTGA AGACTTACTC GATATTTCGC GGATTATTCG CGGTAACATT
CGCTTACTTG TACGCCCCAC AAAATTGATT CCCGTAATTC AAGCAGCACT AGATACTGTT
CGCCCAATTG CCAATACCAA ATCAATCCAA ATTATATCTC GCCTGAATTT TGATATTGGT
TTAGTTTCTG CCGACCCAGA ACGTTTACAG CAAGTGATTT GGAACTTACT TTCCAATGCA
GTCAAGTTTA CTCCTGAAGG CGGACGGGTA GAAATTTGCC TAGAACAAGT AGAGACTAAT
GTGCAGATTC GGGTAACTGA CACAGGTAAA GGCATTAGTC CTGAGTTTTT ACCTTATGTA
TTTGACCGTT TCCGCCAAGC AGATGCTACC ACAACCAGAA ATCAAGGGGG ACTAGGTTTA
GGTCTGGCGA TCGTGCGTAA TCTCGTTGAG CTTCACAATG GTACAGTTTC AGTTGCTAGC
CCAGGAGAAG GACAAGGAGC GACATTTACG GTCCAACTAC CACTCTTACC AAGTTACTCC
ACAGTCACCC CAGAAGAACC CTTGCTTCAA CGACAGACAA CCTGGGATGC TAAAGTCCAA
ATCAGAGGAC TAAAAATTTT AGCAGTTGAT GATGAACCAG ATACTAGAGA ATTTCTCAAA
ACTGCCTTAG AACAATACGG AGCAATTGTG ACAACCGCAG CCTCCACCAG TGAAGCCTTA
AAACTGTTGC AATTAGTGAA GCCTGATGTG CTACTAAGTG ATATTGGGAT GCCAAATGAA
GATGGCTACG CTCTAATTCG GCAAATTCGA GCGCTATCAT CAGAACAAGG GGGAAATGTC
CCAGCTGCCG CCCTGACCGC TTACACCAGA CAAAGCGATC GCCTCCTTGC CCTAACCGCC
GGATTTCAAA TTCATATATC CAAACCAATT GAGCCAATCC AGTTATTAAA AATTGTTGCC
ACCCTGGCTG GCAACAACTC GAATTGA
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| Protein sequence | MAAGLGLGVV GITKADIEGK TIWEALPPET SSEVELPYRQ AFAGISSRFE APYGHRVYEV
HVLPVRNDDG EIFAGMTITQ EITERKQSEL ALQDALQLLN LHIDTTPLAV VQWDCHLCVT
RWSSTAEKIF GWRTEEVIGK YFQDLHMVYE EDMTAVAEAS NRLLSGQESQ IIQYNRNYTK
DSRVIYCEWY NSSITNEAGS VTSVLSLVLD VTERIQAEKA LRQSELMVIE ERAQALERER
AARIELERAS RMKDEFLAIV SHELRSPLNG ILGWSRLLRT RKLSPEKIEQ ALESIERNAQ
AQTQLIEDLL DISRIIRGNI RLLVRPTKLI PVIQAALDTV RPIANTKSIQ IISRLNFDIG
LVSADPERLQ QVIWNLLSNA VKFTPEGGRV EICLEQVETN VQIRVTDTGK GISPEFLPYV
FDRFRQADAT TTRNQGGLGL GLAIVRNLVE LHNGTVSVAS PGEGQGATFT VQLPLLPSYS
TVTPEEPLLQ RQTTWDAKVQ IRGLKILAVD DEPDTREFLK TALEQYGAIV TTAASTSEAL
KLLQLVKPDV LLSDIGMPNE DGYALIRQIR ALSSEQGGNV PAAALTAYTR QSDRLLALTA
GFQIHISKPI EPIQLLKIVA TLAGNNSN
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