Gene Ava_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1627 
Symbol 
ID3681871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2042094 
End bp2042471 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content43% 
IMG OID637716967 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_322145 
Protein GI75907849 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.113437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC GCATCTTGGT AATTGACGAT GAAGAGTCGC TGCGAGACCT TGCCTGTACC 
TGCTTAGAGG ATTTGGGAGG ATGGGAGGCA ATTATCGTTC AATCGGGTCG TGAAGGACTT
TTGAAAGTCC AAAAGTATCT GGTGGATGTA GTTCTCCTTG ATGTGTCAAT GCCTGACATG
GATGGGTTTC AAGTTTACGA GCAAATAAAA GCTAATCCTA AGACTCAGGA TATTCCCATA
ATTTTGCTCA CGGCTAAGGT ATTACCAGAT GATTACAAGC GCTTTGCTCA ATTGGATATA
GCCGGAGTCA TCACTAAACC ATTCAACCCA TTACTGATTT GCGAACAAAT CATGCAAATG
CTTGGTTGGA GTGATTAG
 
Protein sequence
MSKRILVIDD EESLRDLACT CLEDLGGWEA IIVQSGREGL LKVQKYLVDV VLLDVSMPDM 
DGFQVYEQIK ANPKTQDIPI ILLTAKVLPD DYKRFAQLDI AGVITKPFNP LLICEQIMQM
LGWSD