Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1609 |
Symbol | |
ID | 3679166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1987529 |
End bp | 1991788 |
Gene Length | 4260 bp |
Protein Length | 1419 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637716949 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_322127 |
Protein GI | 75907831 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.169022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTAA ATAATTATAG TCAAAACCTA GAAAGTCCAA ATAGTGAAAA TTTTATATAT AGAGATATAG AAATTGCGAT TCTGTCGAGT TTAACTGTTG ATGATTGTGT AGTTATAGAG AAACAAACAA AAAATCTAGA ATCAGAATTA GTTGCTTATA TAGTTCCATC AGGGTTGTTT GTACCAGAAC AATTATTGTC TCACCTGCAA GCAATTCTAC CTAGAGAATT AGTACCTACC GCCATAGTCA CAATCTCCAC CATACCCCTA ACAAGTACAG GTCAGGTAGA TGAAGTTACT CTAGCTAGTT TAGAAGTTAT TGACTCCGAC TTAATATATC GCGCACAGAA GCAACTAGAG TCATTGTCAG CAATTGAACG TGTTGCAGTG GTGGCTGAAC CATTGGTGAC AAATGTTCCT CCTGTGCATT TGCAAGACTT ACTAGGTGAA ACTGAGGCGA TCGCCTTTGA AGATAGTCAG CAAAATTTAC AAGCAACTAT ACCTAGACAG AACGTAGAAA ATCAGGAGAC CTTTTCATCA AAAAATTTAG CTATTAGTCA AGGGGAACCT CTGCCACAGT CCGAAAATGC TCCTAAAACT TTAAAAGAAT TATTACAAAA AGCTACTCAA AATTCGACTA AAAATATTAT TTATATTCAA CCAGATGGTA GTGAAAAATT CCAATCATAT CGGGAAGTAT GGCAAGATGC TCAACGGATT TTATCTGGGT TAAGAAAGCT AGGACTTAAG CCCCAAGATA AAGTAATTTT TCAACTAGAA GACAATCAAG ATTTCATTTG TGGTTTTTGG GCTTGCGTGC TTGGTGGCTT CGTTCCAGTA CCCATATCCA TCGCCCCAAC CTACGAATTA GCTAATAGTA TTGCCAGCAA ACTGCAAAAC ACTTGGCAGA TGTTGGATAA ACCGTTTGTA CTAACAAATG CTGCCTTAGC CCCCAAAATT GATGACTTAT CCAAATTTTT AAAATTAGAA AACTTTCAAT TTGCAATTAT TGATCAGTTG CGTGAGTGTG AACCGGATTT AAATCTGTAT CAAAGTCAGC CAGAGGATTT AGCGATTTTG TTCTTGACTT CTGGTAGCAC TGGTATACCC AAGTGTGTGA TGCTCAATCA TCACAATTTA TTGAGTATGA CAACTGGCTT AATTTTAATG GGTCATTTCT CCAGCCAGGA AAGTGTTTTA AATTGGATGC CTTTGGATCA CGTCGGTGCG CTAGTTTCTC TCAGTATTAT GGCTGTGAGT TTAGGTTGCC AACAAATCCA TGTACCTACT AACTTGATTG TCCAGAACCC GCTTTTGTGG CTGGATTTAA TTGACAAACA TCAAGCCACG ATTAGTTGGG CCCCTAACTT TGCCTTTTCG CTGATATGCG ATGCTTTGGG CGATTCTATC TACGGAAAGA TGGGTGAACA GTATCGGCCT GAAAATAATC AAAAACACTG GGATTTATCA TCTATGGGTT TTGTGATCAA CGCAGGAGAA CCCATTGTTA CCAAGATAGC CAGGAATTTC TTAAAACTGC TTCGCCCTTA TGGTTTACCA ACGAATGCGA TTCATCCAGC CTTTGGGATG AGCGAAACCT CTTCTGGGAT TACATACTCT GATAGTTTTT CTCTAGAATC TTCATCAGAT GACAGTTTAT TTGTAGAATT AGGGCTGCCA CTTGCTGGGG CTTCACTGCG GATTGTTGAT GAAAATGAAC AAATAGTTAC AGAAAGTACG ATTGGGCGTT TACAGGTTCA AGGTGCATCT GTGACTTCTG GTTACTATCA AAATCCACAG GCGAACCAAG AAATTTTTAC TTTTGATGGT TGGTTTAACA CCGGAGATTT AGGTTTCCTC CATCAAGGGC GTTTAACTAT TACTGGACGG CAGAAAGATG TAATTATCAT TAATGGGCTA AATTACTATT GCCACGAAAT CGAGGCCGCA GTTGAAGAAA TTAAAGAAGT AGAAGTTTCT TATACAGCTG CTTGTGCTGT TAGACAACCA GGAATTCATA CTGATAAACT AGCGATCTTC TTCCATACTG CGATCGTTGA TGACACTAGT TTATTAACTC TGCTAAAGGA AATTCGTACC TCCGTTGTCA ATAAAGTGGG CATAAACCCG GATTATTTGC TGCCAGTAGA GCCAGAAGCT ATTCCTAAAA CCGCCATTGG AAAAATCCAG CGATCGCAAC TGAGTCGGCG CTTCAATACA GGTGAATTTA AATCAGTTAT TAAACACGTT GATATATTAC TCGGTAACGC CAATACCATT CCTGATTGGT TCTACCGTCA AGTATGGCAG CCCAAAAATC CTATTACTTT TAATTCTTCT TTAAACCTTA CTAATTGCAC CTTGGTATTT CTAGATGCTT TTGGTTTGGG TACATATTTA TGTCAAATAT TATCAGAGCG TAACCTGCAA TACATAACAG TTTCTCCAGG TGAAGATTTT CGCAAAATCA ATCACTCACA CTACACAATT ACCCCAGGGC AGGCCAAAGA CTACAAACTA TTACTCAAAT CTCTAGCAAC CGATAATATT ACCATTGGGC AGATTCTTCA TCTATGGAAT TATGACCAAT ATCTTGGCGA AATCACAAGT ATTGAGGCTT TGGAAGCAGC GCAAGAAAAG GGAATATATA GTTTATTATT CCTAGTTCAA GCTTTAGCAA AAGTTCAGGG TGTAGATAGT CCTATTCAAT TACTATTTAT ATCTTCTTAT GTTCAGTCTA TTTCCTCAGA TGACCCCATA GCTTATGAAA AATCACCAGT TTTAGGACTG CTAAAAACCA TTCCTCAAGA ATTACCTTGC TTAAACTGTC GCCATATAGA TTTGCCATTT GCTGAAGTTG AGAAAACTGG AACTTATCTC TTACAAGAGA TGCAGGTTTC CTCAAAAGAA CGAGAGGTAG CTTATAGAAA TGGGCAACGT TTCATTCCTC GCCTAGAAAA AGTAGATTTT ACCAGCAAAC CTAAATCTCC TATTTCCTTC AAGCACAGAG GTACTTATTT AATAACTGGA GGATTGGGTG GTATAGGAAT TGAAATTGCG CGTTACTTAC TAAAACATTA CCAAGCTCGA CTCCTATTAG TTGGTAGAAC TCCTTTAATT CATCATGGAA AAGAAGATGT TATTACACAA CATCAAAAAG CTTACCAAGA ACTATCACAG CTTGGGGGAG AAGTAATTTA CGAAGCTGTT GACATATGTG ACTTAAACCA CTTGCAAATA ATAGTTGAAA AAGCTCAATC CCAATGGTGT AAAAATCTTG ATGGAGTACT TCATTTAGCT GGAACTTCTC ATGAGCAAAT GATACTTGAA GAAACTCAGG AGAACTTAGC AGCAATACTA CGTCCTAAAG TGTTTGGTGC TTGGACACTA CATCAATTGG TAAAAGATAA CAAAGGCAGC ATTTTTATCA ACTTTTCTTC GGTAAACGGT TTTTTTGGTA GTACTGCTGT TGGTGCTTAT GCTGCGGCTA ATAGTTTTCT GGACGGCTTT TCTCATTACC AAAACTCACA CAGTGAATTA ACAAGCTATT GTTTGAGTTG GAGTATGTGG CATGAAATAG GCATGAGCCA AGGATATCAG CTGAAGAATC TCATCCGCAC CAAAGGTTTC TATGTCATGT CTTCCTCTCA AGCAATATCT TCAATGCTTG CCACCTTACA ACATCAGCAA ACCCATCTAT TAATAGGTTT GGATGGCAGC AACCAAAACA TTCAACTTTG GCAGTCTCAA GCCTTTAATT TACAAAAATT ATCTGCTTAT TTTACTACTC ATAGTAGTGA CGATATTTTT AAATTACAGC ACTTAACTGT GGAAGACCGC TTTGGAAATT CCTGCAATTG TAACTTAGTC AAGCTGAAAG AAATACCCTT AACCGAAAGT GGTGCAATTG ATAAGAACAA ATTAATTCGA CAATTTACTG GACAGGACAC AGGAACTCAT GTAGCACCCC GAAATAAGTT AGAGCAACAA ATTGCTGATA TTTGGGAACA AGTTTTGGGA AGACCAGTGT TTAGTGTTCA TCACAACTTT TTTGAATTGG GAGGAAATTC CCTTGTCGGA ACGCAAGTGA TTTCTCGGTT ACGAAATACC TTCTCCATTG ATTTGTCTTT ACAGAGTTTA TTTAAATTAC CCACTGTAGC TGAATTAGCT AGCAATATAG AGGTAATAGA GATATTAATG AAAAATGAAT ATGCCATTGC TAATGACATA GCAGAAGAAT ATGAAGAGGG ATGTTTGTAA
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Protein sequence | MQLNNYSQNL ESPNSENFIY RDIEIAILSS LTVDDCVVIE KQTKNLESEL VAYIVPSGLF VPEQLLSHLQ AILPRELVPT AIVTISTIPL TSTGQVDEVT LASLEVIDSD LIYRAQKQLE SLSAIERVAV VAEPLVTNVP PVHLQDLLGE TEAIAFEDSQ QNLQATIPRQ NVENQETFSS KNLAISQGEP LPQSENAPKT LKELLQKATQ NSTKNIIYIQ PDGSEKFQSY REVWQDAQRI LSGLRKLGLK PQDKVIFQLE DNQDFICGFW ACVLGGFVPV PISIAPTYEL ANSIASKLQN TWQMLDKPFV LTNAALAPKI DDLSKFLKLE NFQFAIIDQL RECEPDLNLY QSQPEDLAIL FLTSGSTGIP KCVMLNHHNL LSMTTGLILM GHFSSQESVL NWMPLDHVGA LVSLSIMAVS LGCQQIHVPT NLIVQNPLLW LDLIDKHQAT ISWAPNFAFS LICDALGDSI YGKMGEQYRP ENNQKHWDLS SMGFVINAGE PIVTKIARNF LKLLRPYGLP TNAIHPAFGM SETSSGITYS DSFSLESSSD DSLFVELGLP LAGASLRIVD ENEQIVTEST IGRLQVQGAS VTSGYYQNPQ ANQEIFTFDG WFNTGDLGFL HQGRLTITGR QKDVIIINGL NYYCHEIEAA VEEIKEVEVS YTAACAVRQP GIHTDKLAIF FHTAIVDDTS LLTLLKEIRT SVVNKVGINP DYLLPVEPEA IPKTAIGKIQ RSQLSRRFNT GEFKSVIKHV DILLGNANTI PDWFYRQVWQ PKNPITFNSS LNLTNCTLVF LDAFGLGTYL CQILSERNLQ YITVSPGEDF RKINHSHYTI TPGQAKDYKL LLKSLATDNI TIGQILHLWN YDQYLGEITS IEALEAAQEK GIYSLLFLVQ ALAKVQGVDS PIQLLFISSY VQSISSDDPI AYEKSPVLGL LKTIPQELPC LNCRHIDLPF AEVEKTGTYL LQEMQVSSKE REVAYRNGQR FIPRLEKVDF TSKPKSPISF KHRGTYLITG GLGGIGIEIA RYLLKHYQAR LLLVGRTPLI HHGKEDVITQ HQKAYQELSQ LGGEVIYEAV DICDLNHLQI IVEKAQSQWC KNLDGVLHLA GTSHEQMILE ETQENLAAIL RPKVFGAWTL HQLVKDNKGS IFINFSSVNG FFGSTAVGAY AAANSFLDGF SHYQNSHSEL TSYCLSWSMW HEIGMSQGYQ LKNLIRTKGF YVMSSSQAIS SMLATLQHQQ THLLIGLDGS NQNIQLWQSQ AFNLQKLSAY FTTHSSDDIF KLQHLTVEDR FGNSCNCNLV KLKEIPLTES GAIDKNKLIR QFTGQDTGTH VAPRNKLEQQ IADIWEQVLG RPVFSVHHNF FELGGNSLVG TQVISRLRNT FSIDLSLQSL FKLPTVAELA SNIEVIEILM KNEYAIANDI AEEYEEGCL
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