| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1608 |
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| Symbol | |
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| ID | 3679165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1986024 |
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| End bp | 1987199 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637716948 |
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| Product | hypothetical protein |
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| Protein accession | YP_322126 |
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| Protein GI | 75907830 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.980557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCTC GGCAAAGCGT TACTGAAATT TTTTCGACTT TTGTGCAGTT CGATGCCGAT
CGCTTCAGTG GTTGGGCGAC GGAATCACGA CTGCGTCGTA GTATCCTCAG TTGTCTGAAG
CACACGCCAA AGGAAACTTC GGAATCTTTT TGGGCTTTGT ATTGGTATAA GTTTTGGCAA
GTTCCGGAAA CTCAACCTCT GGCGAAGCAA CATCTAACTG CTTATCTGCA AGAACCTTGT
TATTGGATAT CCCAAAAAAC AGCCGCTAAT TTTATTAGTA CGCAATACAG GTTATCGGAC
TGTTTCCAAG TAGCGATCGC CCAAGTTGAT CGAGTCCTCA AAGGTTTCGA TCCCAGTCAA
AGCAGTACCC TGAAAAACTA CGCCAGTCTG ATTTTTGGTA GTGCGATCCG CGAAACTTTA
CGCCAACGTC AAGAAGTCGA TATCTGTACT GATTGGGGTC TGTTACGCAA AATCAGCCAA
AAGCGCTTGC ATGAGTCTTT ACAAAACAGT GGTTTATCTT CAACGGAGAT TCCTGCCTAT
ATCCTCGCTT GGAATTGCTT TAAAACTTTG TATCTCCCTA CCAAGGCGGC TAACTCTCGC
CAACTGTCCC GACCAGATGA TGCTACTTGG GATGCGATCG CCAAAGCTTA CAATTCCCAA
AGCAACCAAC CAACTAACCC CCAAGATATC GAAAAGTGCT TGTTAAATGC AGCAAAAGCA
GCCCGTAAAT ATCTTTATCC CACCCCAGAT TCTCTCAATG TCTCCAAAGG TGCGGATGAT
TCATTTGAGT TGCTAGATAA TCTCCCAGGG ACAGAACAGC CATCCCTAAT TCAGGAAATT
ATTGCCCAAG AAGAAGAACA AGCCAGAACT TCTCAACAAA CGGAAATTTA TCAAGTCTTA
GTTGAAGCGA TCGCTAAACT TGACACGCAA CTACAACAAA TACTGCAATT GTACTACGAG
CAAAAACTCA ATCAAGATGG CATTGCTCAA GAATTAGACA TCAAACAGTA CACTGTTTCC
CGGCGATTAA CCAAAGCCAA GGAAACCCTA CTACGGTCTG TAGCTGGCTG GAGTCAAGAC
AAACTGCATA TTTCCCTGAC TTCAGACATA CTCAAAGCTA TGAGTACATT AATAGAAGAC
TGGTTACAGA ATTACTACAA TGTCTCCAAA GCATGA
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| Protein sequence | MQPRQSVTEI FSTFVQFDAD RFSGWATESR LRRSILSCLK HTPKETSESF WALYWYKFWQ
VPETQPLAKQ HLTAYLQEPC YWISQKTAAN FISTQYRLSD CFQVAIAQVD RVLKGFDPSQ
SSTLKNYASL IFGSAIRETL RQRQEVDICT DWGLLRKISQ KRLHESLQNS GLSSTEIPAY
ILAWNCFKTL YLPTKAANSR QLSRPDDATW DAIAKAYNSQ SNQPTNPQDI EKCLLNAAKA
ARKYLYPTPD SLNVSKGADD SFELLDNLPG TEQPSLIQEI IAQEEEQART SQQTEIYQVL
VEAIAKLDTQ LQQILQLYYE QKLNQDGIAQ ELDIKQYTVS RRLTKAKETL LRSVAGWSQD
KLHISLTSDI LKAMSTLIED WLQNYYNVSK A
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