Gene Ava_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1600 
Symbol 
ID3679157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1975316 
End bp1976113 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content45% 
IMG OID637716940 
ProductABC transporter-like 
Protein accessionYP_322118 
Protein GI75907822 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0157688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTG CGAACTTTTC CTTAGCAACT AATTCCATGC GGGAACCAGT GGATACATCA 
ACAGCAACAG CAACAATTAA TATCTCCCAT CTAGGGGTAC ACTACCGTAC ACAAGAAGCC
TTGCGGGATG TTAACTGTAT TGTCAAACCG GGACGAATAA CAGGAATATT TGGCCCTAAC
GGTGCTGGTA AAAGCACTCT GATGAAAGCA ATGTTAGGCT TGGTTCCCGT TAGCAGTGGT
AAGGTATTAT ACCAAGAAAA ACCCCTGATG CAGCAATTGG GGAAAGTTGC TTACGTTCCC
CAACGTAGCC AAATTGACTG GACTTATCCC GCCGTAGTTT GGGATGTGGT GATGATGGGA
CGGGTAAAGA AAACAGGTTG GTTACGTAGT TTCTCGGCTG TGAGTCGCCA AGTTGCCAAG
AATGCCTTAG AACGAGTGGG AATGTTGGAT TATTGCGATC GCCCCATAGG ACAATTATCA
GGGGGACAAC AACAACGGGT ATTTTTAGCG AGGGCTTTAG CACAACAAGC AGACATATTC
TGTTTTGATG AACCCTTGGT AGGTATCGAC CAAAAAACCC AAACAGTTAT TTTTGAGGTT
TTCCATGAAC TAGCTGCGGC TAACAAAATT GTGTTGGTAG TTAACCACGA TTTAGGCGAA
TCCATCAGCC ATTTCGATGA TTTAGTATTA CTCAACCGTG AATTAATCGC CGCAGGTTCC
CGCCAACAAG TACTTACAGA GGATAACCTG CACCAAGCTT ACGGCGGTAA AGTCATCTAT
TTCTCGGATG CAGCTTGA
 
Protein sequence
MQIANFSLAT NSMREPVDTS TATATINISH LGVHYRTQEA LRDVNCIVKP GRITGIFGPN 
GAGKSTLMKA MLGLVPVSSG KVLYQEKPLM QQLGKVAYVP QRSQIDWTYP AVVWDVVMMG
RVKKTGWLRS FSAVSRQVAK NALERVGMLD YCDRPIGQLS GGQQQRVFLA RALAQQADIF
CFDEPLVGID QKTQTVIFEV FHELAAANKI VLVVNHDLGE SISHFDDLVL LNRELIAAGS
RQQVLTEDNL HQAYGGKVIY FSDAA