| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1457 |
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| Symbol | |
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| ID | 3682539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1798507 |
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| End bp | 1799697 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637716796 |
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| Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_321975 |
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| Protein GI | 75907679 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00560715 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000331865 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAAAT TTCCAGTGGT CGCTCAAGCA GGTGCATCCC AACCCAACAA CATTCAGCAA
CATGAACCCT CAATACAGCC ATCAGTGCTA CAGAGGGTAG GAAATGATTT TGATGTCCGT
ATGATGCAAC GGTGTTTAGA ACTGGCACGC CGTGCTTTAG GACGTACTTC TCCTAACCCG
TTAGTAGGGG CAGTTGTTGT CAAGGATGGG GAAATTGTGG GGGAAGGGTT TCATCCCCGC
GCAGGTGAGC CTCATGCAGA GGTTTTTGCT CTCAGGGCAG CAGGAGAACT GGCTCGTGGT
GCTACTGTAT ACGTCAATTT GGAACCTTGT AATCATTATG GACGTACTCC CCCTTGTTCG
GAAGGATTGA TTGCTGCTGG TGTAGCGAAG GTGGTGGTGG GTATGGTTGA CCCGAATCCC
CTGGTAGGTG GTGGTGGGAT TGAACGGTTA CGTGGGGCTG GGGTGGAGGT GTTGGTGGGT
GTGGAAATGG CAGCCTGTCA GCAATTGAAT GAAGGCTTTG TGCATCGGAT TCTTCACAAA
AAACCTTTGG GTATTTTGAA ATATGCCATG ACGTTGGATG GCAAAATAGC AACTGTCTCT
GGTCACAGTG CTTGGGTGAC CAATCCATCA GCTCGTGGCG AAGTTCATCA ATTACGGGCT
GCTTGTGATG CGGTAATTGT TGGTGGTAAT ACGGTACGGC GAGATAATCC TTACTTAACT
AGTCACCAAG AAGGGGTACA TAATCCTTTG CGGGTGGTGA TGAGTCGTCA GCTAGATTTG
CCAGTGGATG CTCATCTTTG GGAAACAGCT GAGGCTCCAA CTTTAGTATT GACTCAAGTA
GGTGCTAATC CAGATTTCCA AAAACTGTTG CAGCAAAAGG GAGTGGAGAT AGTAGAATTA
GCATCGCTGA CACCAGAATT TGTGATGTCT CACTTATATG ATCGCGGTTT TTGTAGCGTG
TTGTGGGAGT GTGGAGGGAC TTTAGCTGCT AGTGCGATCG CTCAAGGTGC AGTACAGAAA
ATTCTGGCCT TTATCGCTCC TAAAATCATT GGTGGTAGCC ATGCACCTAC GCCTGTGGGT
GACTTGGGCT TTGATACGAT GACAGAAGCT CTAATTCTAG AACGAGTGCG TTGGCGTGTG
GTGGGTTCTG ATTGCTTAGT AGAAGGTTAT TTGCCCTCAC TAAACCCATA A
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| Protein sequence | MDKFPVVAQA GASQPNNIQQ HEPSIQPSVL QRVGNDFDVR MMQRCLELAR RALGRTSPNP
LVGAVVVKDG EIVGEGFHPR AGEPHAEVFA LRAAGELARG ATVYVNLEPC NHYGRTPPCS
EGLIAAGVAK VVVGMVDPNP LVGGGGIERL RGAGVEVLVG VEMAACQQLN EGFVHRILHK
KPLGILKYAM TLDGKIATVS GHSAWVTNPS ARGEVHQLRA ACDAVIVGGN TVRRDNPYLT
SHQEGVHNPL RVVMSRQLDL PVDAHLWETA EAPTLVLTQV GANPDFQKLL QQKGVEIVEL
ASLTPEFVMS HLYDRGFCSV LWECGGTLAA SAIAQGAVQK ILAFIAPKII GGSHAPTPVG
DLGFDTMTEA LILERVRWRV VGSDCLVEGY LPSLNP
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