Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1452 |
Symbol | |
ID | 3682534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1794080 |
End bp | 1794973 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637716791 |
Product | ABC transporter-like |
Protein accession | YP_321970 |
Protein GI | 75907674 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.218663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00673378 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTAAATA TTCATAATTT AAATAAATCC TATGGCGATC GTCAGGTTCT ACAAAATTTA ACTCTGAATA TTACTAACAG TGAAATTTAC GGTTTACTAG GTGCAAATGG CTCTGGTAAA ACCACAACAA TTAATATTAT TTGTAATTTA CTGAAAGCTG ATAGTGGTGA GATTAAACTT AATAATCAGC TTATTTCTGA ATCAACCAAA AAACTAATTG GTATTGCCCC TCAAGAAAAT CTTTTATATA AAACCCTGAC TTGTGAAGAA AATCTCCAGT TTTTTGGAGA AATTTATGGC TTAAGTAGAA AAAATATTCA AAAACAAACT AAAGATATTT TAGATGCTAT CAACTTATCA GATAGGGCAA AAAGTCCGGT AGAAACTTTG AGTGGCGGGA TGCAACGGCG ATTAAATATT GCTGTAGCAT TAGTACATCA GCCGAAGTTG GTAATTCTTG ATGAACCAAC TACAGGTTTA GATATTGAAG CACGTTACGA AATTTGGGAA TTGATTCGAC GACTGAAAAC TCAGGGAATT ACAGTTTTAC TCACCACTCA TTTATTAGAT GAAGCAGAAC GCTTATGTGA AAAAATTGGT ATCCTTAAAA ACGGACAGAT TTTAGTTGAG GGTAGTTTAG CTGAGTTACG TAATTTAATT CCAGCACAAG AGGTTTTATT ATTGAAAACT ACACAAGAAA AAGAGGCGAT CGCTCGCGCT CAAACCTACG GTTTTACCCA TAGATACTAT GATCAAGAAT TAGCCTTCTG GCTACCTGAA TCTTTGGAGT TAAAAGAGAT AATTTCTCGT TTTGAAGGTA TAAATATCGA GGCAATTTCT CGCCAACCAG TAAAACTAGA ACATATTTAT TTAGAAGTAA CTCAACAAAT TTAA
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Protein sequence | MLNIHNLNKS YGDRQVLQNL TLNITNSEIY GLLGANGSGK TTTINIICNL LKADSGEIKL NNQLISESTK KLIGIAPQEN LLYKTLTCEE NLQFFGEIYG LSRKNIQKQT KDILDAINLS DRAKSPVETL SGGMQRRLNI AVALVHQPKL VILDEPTTGL DIEARYEIWE LIRRLKTQGI TVLLTTHLLD EAERLCEKIG ILKNGQILVE GSLAELRNLI PAQEVLLLKT TQEKEAIARA QTYGFTHRYY DQELAFWLPE SLELKEIISR FEGINIEAIS RQPVKLEHIY LEVTQQI
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