Gene Ava_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1452 
Symbol 
ID3682534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1794080 
End bp1794973 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content33% 
IMG OID637716791 
ProductABC transporter-like 
Protein accessionYP_321970 
Protein GI75907674 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.218663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00673378 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTAAATA TTCATAATTT AAATAAATCC TATGGCGATC GTCAGGTTCT ACAAAATTTA 
ACTCTGAATA TTACTAACAG TGAAATTTAC GGTTTACTAG GTGCAAATGG CTCTGGTAAA
ACCACAACAA TTAATATTAT TTGTAATTTA CTGAAAGCTG ATAGTGGTGA GATTAAACTT
AATAATCAGC TTATTTCTGA ATCAACCAAA AAACTAATTG GTATTGCCCC TCAAGAAAAT
CTTTTATATA AAACCCTGAC TTGTGAAGAA AATCTCCAGT TTTTTGGAGA AATTTATGGC
TTAAGTAGAA AAAATATTCA AAAACAAACT AAAGATATTT TAGATGCTAT CAACTTATCA
GATAGGGCAA AAAGTCCGGT AGAAACTTTG AGTGGCGGGA TGCAACGGCG ATTAAATATT
GCTGTAGCAT TAGTACATCA GCCGAAGTTG GTAATTCTTG ATGAACCAAC TACAGGTTTA
GATATTGAAG CACGTTACGA AATTTGGGAA TTGATTCGAC GACTGAAAAC TCAGGGAATT
ACAGTTTTAC TCACCACTCA TTTATTAGAT GAAGCAGAAC GCTTATGTGA AAAAATTGGT
ATCCTTAAAA ACGGACAGAT TTTAGTTGAG GGTAGTTTAG CTGAGTTACG TAATTTAATT
CCAGCACAAG AGGTTTTATT ATTGAAAACT ACACAAGAAA AAGAGGCGAT CGCTCGCGCT
CAAACCTACG GTTTTACCCA TAGATACTAT GATCAAGAAT TAGCCTTCTG GCTACCTGAA
TCTTTGGAGT TAAAAGAGAT AATTTCTCGT TTTGAAGGTA TAAATATCGA GGCAATTTCT
CGCCAACCAG TAAAACTAGA ACATATTTAT TTAGAAGTAA CTCAACAAAT TTAA
 
Protein sequence
MLNIHNLNKS YGDRQVLQNL TLNITNSEIY GLLGANGSGK TTTINIICNL LKADSGEIKL 
NNQLISESTK KLIGIAPQEN LLYKTLTCEE NLQFFGEIYG LSRKNIQKQT KDILDAINLS
DRAKSPVETL SGGMQRRLNI AVALVHQPKL VILDEPTTGL DIEARYEIWE LIRRLKTQGI
TVLLTTHLLD EAERLCEKIG ILKNGQILVE GSLAELRNLI PAQEVLLLKT TQEKEAIARA
QTYGFTHRYY DQELAFWLPE SLELKEIISR FEGINIEAIS RQPVKLEHIY LEVTQQI