Gene Ava_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1449 
Symbol 
ID3682531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1790609 
End bp1791574 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content42% 
IMG OID637716788 
Productglycosyl transferase family protein 
Protein accessionYP_321967 
Protein GI75907671 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.192558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0368416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCA AATTCACCGT GGTGATATGC ACTTATAACG GTGCAACAAG ACTGCCTAAT 
GTACTTGATA AATTGCAAAA TCAAATAGGT ACAGAAGCGA TTCCGTGGGA AATACTTGTA
GTTGATAACA ACAGTACAGA CAGCACCAAA CAAGTAGTCC AGCAGTATCA AAATACTTGT
TTTAAATTCG GGCAATTGCG ATATAGTTTT GAGCCAGAAC AAGGATTAGC GATCGCCCGT
CAACACGCTG TTGCAGCAGC CAGAGGAGAG CTAATTGGCT TTTTAGATGA CGATAATGTT
CCCTCTCCCA CATGGGTTGC TAGTGCCTAT TTATTTGCTC AAAATCATCC TCGTGCAGGT
GCTTATGGTA GTCGTATTCA GGGTGAATTT GAAGCTCCTC CTCCAGCTGA TTTCCAACGC
ATAGCAGCAC TACTAGCCTT AACAGAGCGA GGCTCGAACA AGCTGCTCTA TGAGCCAAAA
AAAAAGGTAC TGCCCCCTGG AGCCGGGTTA GTGGTGCGAA AACAAGCTTG GTTAGAAAAT
GTGCCAGAAA GATGTTTTCT CCAAGGTCGA GTTTGCGAAC CCTATTTACC AGGGGAAGAT
TTAGAAGCAC TACTACATAT TCAACAAGCC GGATGGGATA TTTGGTATAA CCCAGAAATG
CAAATAACTC ACCAAATCCC TCATTGGCGG TTAAAGAAAG ATTATCTTGT TGATTTATGC
CGTGGTATTG GGTTGAGCCG TTATCACACG CGGATGTTGA GTGTTAAACC TTGGCAAGCT
CCTGTTTTAT TTTGGGTATA TATTTTTAAT GATCTACGTA AACTTCTTCT GCACTTATGC
AAATATCGCG GTAGCGTCAA GAGGGATTTG ATTGCAGCTT GTGAACTGGA ACTATTTATT
GGTAGCTTGC TAAGTCCTCC CTATATTTGG CAAGCATACA TCAAAAAATA TTTTCATTTA
ATTTGA
 
Protein sequence
MIIKFTVVIC TYNGATRLPN VLDKLQNQIG TEAIPWEILV VDNNSTDSTK QVVQQYQNTC 
FKFGQLRYSF EPEQGLAIAR QHAVAAARGE LIGFLDDDNV PSPTWVASAY LFAQNHPRAG
AYGSRIQGEF EAPPPADFQR IAALLALTER GSNKLLYEPK KKVLPPGAGL VVRKQAWLEN
VPERCFLQGR VCEPYLPGED LEALLHIQQA GWDIWYNPEM QITHQIPHWR LKKDYLVDLC
RGIGLSRYHT RMLSVKPWQA PVLFWVYIFN DLRKLLLHLC KYRGSVKRDL IAACELELFI
GSLLSPPYIW QAYIKKYFHL I