Gene Ava_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1439 
Symbol 
ID3682580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1780712 
End bp1782451 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content45% 
IMG OID637716778 
Productflavin reductase-like, FMN-binding 
Protein accessionYP_321957 
Protein GI75907661 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0426] Uncharacterized flavoproteins
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCGA TGTCTACGAC CGGCAACGCC CACACAGAAA ATGTTCAGCA TCGTCTGACT 
GTAGAAACTG TAGAAATTGC CCCTAACACT ACGGCGATTC GCTGTCTAGA CTGGGATCGC
GATCGCTTCG ATATCGAATT CGGACTACAA AACGGTACGA CTTATAATTC ATATCTAATT
AGAGGCGAAC AGACAGTTTT AGTTGATACT TCTCACCAGA AGTTCCGCCA GCTGTATTTA
GAAACACTAA AAGGTCTAAT TAACCCCAAG GCTATTGATT ACATTATTGT CAGTCATACA
GAACCAGACC ACAGCGGTTT GGTGGAAGAT GTGCTGCAAT TAGCACCAAG AGCAACTGTC
TTGGCTTCTA AGATTGCTTT GCAATTTTTG GAAGGTTTAG TACACGATCC TTTTTCTAAG
CGGATTGTCA AAAGTGGCGA TCGCATCGAT ATTGGTAAAG GTCACGAAAT TGAGTTTGTT
AGTGCGCCTA ATCTGCACTG GCCTGATACC ATTTTTAGCT ATGATCGCAA AACCGAAGTT
ATCTATACTT GTGATGCTTT TGGGATGCAC TTTTGCGACA ACCGCACTTT TGATGAAGAC
TTAGAAGCGA TTGAAGCTGA TTTCAGATTT TACTACGACT GTCTCATGGG GCCAAATGCG
CGATCGCTAT TGAACGCGAT GAAGCGCATG GGTGAACTGG GCAAAATTAA GATAATCGCT
AACGGTCACG GGCCTCTGTT GTACCATCAT TTAGATGTGT TGACTGAGTG TTACCAAAGC
TGGAGCCAAA GACAAGCCAA AGCGGAAACC ACCGTTGGTT TATTCTATGT CGCCGACTAT
GGCTATAGCA ACTTACTAGT TCAAGCCATC GGCGAGGGTA TTCAAAAAAC TGGTGTTGCT
GTAGAAATGA TCGACCTCAG CACAGCAGAA ATTCAAGAAA TTCAAGAATT GGCAGGTAGG
GCAGCTGGTT TAATTATTGG TATGCCTCCC ACAACATCGG TAGCAGCTCA AGCTGGTATT
AGTTCCCTGC TATCTGTAGT TAAAGATAAG CAAGCAGTCG GCTTGTTTGA ATGCTTCGGT
GGCGATGACG AACCCGTTGA TACCATCCGC CGCAAATTTA TTGATTTGGG TGTGAAAGAA
GCCTTCCCGG CGATTCGGAT TAAAGATGTT CCTGGCGCAT CCGCATACCA ATTATGTACA
GAAGCGGGTA CAGACTTGGG ACAACTGCTG ACACGGGAAC GTAACATCAA GCAAATCAAG
TCCCTCGATG TCAACATGGA AAAGGCATTG GGACGGATTA GCAACGGTCT GTATATCGTC
ACAACCAAAA AAGGTGATGT TAGCAGCGCC ATGTTAGCTT CCTGGGTATC CCAAGCCAGC
TTGCAACCAT TGGGCTTTAC GATTGCCGTA GCTAAAGATA GAGCTATTGA TACCTTAATG
CAAGTAGGCG ATCGCTTCGT TCTCAATGTC TTAGAAGAAG GCAATTACCA AGAACTGAAA
AAACAATTCC TCAAGCGCCT CCATCCCGGT GCAGACCGCT TTGCCGGAGT AAGAACCCAA
ATTGCCAAAA ACGGCTCCCC CATCCTCACA GACGCTCTAG CATACATGGA ATGCGAAGTC
CAAAGCAGCC TAGAATGCAG CGATCACTAC ATTTTATACT GCACCGTGGA AGATGGTCGC
GTTTCCAAGC CCGATGGACT AACAGCAGTT CGTCACCGCA AAGTAGGCAA CTATTACTAA
 
Protein sequence
MVSMSTTGNA HTENVQHRLT VETVEIAPNT TAIRCLDWDR DRFDIEFGLQ NGTTYNSYLI 
RGEQTVLVDT SHQKFRQLYL ETLKGLINPK AIDYIIVSHT EPDHSGLVED VLQLAPRATV
LASKIALQFL EGLVHDPFSK RIVKSGDRID IGKGHEIEFV SAPNLHWPDT IFSYDRKTEV
IYTCDAFGMH FCDNRTFDED LEAIEADFRF YYDCLMGPNA RSLLNAMKRM GELGKIKIIA
NGHGPLLYHH LDVLTECYQS WSQRQAKAET TVGLFYVADY GYSNLLVQAI GEGIQKTGVA
VEMIDLSTAE IQEIQELAGR AAGLIIGMPP TTSVAAQAGI SSLLSVVKDK QAVGLFECFG
GDDEPVDTIR RKFIDLGVKE AFPAIRIKDV PGASAYQLCT EAGTDLGQLL TRERNIKQIK
SLDVNMEKAL GRISNGLYIV TTKKGDVSSA MLASWVSQAS LQPLGFTIAV AKDRAIDTLM
QVGDRFVLNV LEEGNYQELK KQFLKRLHPG ADRFAGVRTQ IAKNGSPILT DALAYMECEV
QSSLECSDHY ILYCTVEDGR VSKPDGLTAV RHRKVGNYY