Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1436 |
Symbol | |
ID | 3682577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1777382 |
End bp | 1778164 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716775 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_321954 |
Protein GI | 75907658 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0303105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACAA GTTTACAAAA CTCTTTAGTT AAACAAATCC GCAAGCTGCA CTCCACCAAG GAGCGGCATA AACAAGGTCT GTTCCTGTTG GAAGGGACGC ATTTGTTAGA AGAAGCTTGT GCAATGGATT ATCCCCTAGA GGTGGTGTGT TGTACTCCAG AATGGGAGGC AAGCCACACA GCTTTGTGGG AAGAGGCTTG TAATCGATGC GATCGCTGTG AGATAGTCAG TGAAGAAGTA TTGCAAGCGA TCGCTACTAC TGTACAACCA GATGGGGTAG TGGCAACAGC AAAGCGCAGC GAACTCCAAA GCCAAATACC ATTTACAGGT GTAGTCCTAG CCTTAGAAAC CATCCAAGAC CCTGGTAATT TAGGGACAAT CATTCGCACT GCGGCGGCTG CTGGTGCTTC CGGGTTATGG TTGAGTCAAG ATAGTGTAGA TTTAGATAAC CCGAAAGTTC TCAGGGCTTC GGCTGGACAG TGGTTTCGTT TAGCCACCGC AGTTAGTGAA GATTTAAAAG CAACAGTGCA GCTTTGCCAG CAAGCAGGAA TGCAGGTAGT AGCCACCTTA CCCACAGCTA AGTTAACTTA TTGGGAAATA GACTGGCATA AACCCAGTTT AATTTTATTG GGGAATGAAG GCGCTGGCTT GTCGCCTGAT TTAGCGGCGA TGGCAGACCA GGAAGTGAAA ATTCCCCTGA GTCCTGGTGT AGAATCTTTG AATGTGGCAA TTACATCCGC CTTAATGTTG TACGAAGTAC AGCGACAGTT AAACTTTCAA TAG
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Protein sequence | MLTSLQNSLV KQIRKLHSTK ERHKQGLFLL EGTHLLEEAC AMDYPLEVVC CTPEWEASHT ALWEEACNRC DRCEIVSEEV LQAIATTVQP DGVVATAKRS ELQSQIPFTG VVLALETIQD PGNLGTIIRT AAAAGASGLW LSQDSVDLDN PKVLRASAGQ WFRLATAVSE DLKATVQLCQ QAGMQVVATL PTAKLTYWEI DWHKPSLILL GNEGAGLSPD LAAMADQEVK IPLSPGVESL NVAITSALML YEVQRQLNFQ
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