Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1420 |
Symbol | |
ID | 3682656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1751665 |
End bp | 1752561 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637716757 |
Product | sodium symporter |
Protein accession | YP_321938 |
Protein GI | 75907642 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCAA ATGTGTTTAC TAATGTGATT TTGCCTTTAG CCCTAGCGAT TATCATGCTG GGTATGGGGC TATCTTTGCA GATAGAAGAC TTTAAACGTG TCACGAAATA TCCTAAAGCA GTCTCTATTG GTTCGATAAC TCAGCTAATT CTTTTACCAA TCATAGGCTT TTTAGTTGCT AAAGCTGTGC CGATGCAGCC AGAAATTGCT GTGGGATTGG TCATTTTGTC TTTGTGTCCA GGCGGCCCTT CATCGAATAT GATTACCTAC TTGGCTAAAG GCGATGTGGC ATTGTCGGTG ACCCTGACTG TCGTCAGCAG TATGGTTACA ATATTTACAA TTCCTATATT TGCTAATTTA GCACTCCAGC ATTTTTTGGG ACAAACGGCA GCGATCGCCT TACCCATTGG TTCCACAATG CTACAAATAT TTTTAATTAC AATTGTGCCG ATTGGGTTGG GAATGTATAT CAAGCGCATC TTTCCCGCAA CCGCCTTGCG CTTAGAAAAA GTAACCAATC GCCTAGCGAT CGCCTTTTTG GCTTTAATTA TTTTGATCCT CGTAATTCGT GAATGGAACC GTATCCCCGG CTTTATTGTG CAAGTGGGTG TGGGAGTAGT AATTTTGAAT ATCCTCGCCA TGTTGTCTGG ATGGTATATG AGTAAATTCT TTCAACTCAA CATCCCTCAG CAAATTTGTG TCGCCATAGA AGTGGGAATT CAAAACGGTA CACTAGCGAT CGCCATCACT GCTGGACTGC TAAAAAACCA AGACATGGCG ATTCCTGCGG CTATTTATAG CTTGTTTATG AATCTCACGG CTTTCGTCGC CATTTACTAC GGTAGAAAGT TATCCGCAAT TAATTCTGTT AGTAATAATT TAGTTGGTAA AGTCTAG
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Protein sequence | MQANVFTNVI LPLALAIIML GMGLSLQIED FKRVTKYPKA VSIGSITQLI LLPIIGFLVA KAVPMQPEIA VGLVILSLCP GGPSSNMITY LAKGDVALSV TLTVVSSMVT IFTIPIFANL ALQHFLGQTA AIALPIGSTM LQIFLITIVP IGLGMYIKRI FPATALRLEK VTNRLAIAFL ALIILILVIR EWNRIPGFIV QVGVGVVILN ILAMLSGWYM SKFFQLNIPQ QICVAIEVGI QNGTLAIAIT AGLLKNQDMA IPAAIYSLFM NLTAFVAIYY GRKLSAINSV SNNLVGKV
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