Gene Ava_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1405 
Symbol 
ID3682699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1733744 
End bp1734151 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content41% 
IMG OID637716742 
Productmannose-6-phosphate isomerase type II 
Protein accessionYP_321923 
Protein GI75907627 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGA GTGAAAACAA TGGGCAGTTA GATGCCAATG ATTCTTCCTC ACATTCAGGT 
TTACGTTACT GGGGTAATGT GGAGGTAATA GAAGAGGGAG AGAGCTATAG AATTAGTCGC
ATTGAAATCA AGCCTAGACA TGGTATTAAA CCCCAAATCC ACTATCACCG TAATGAGCAT
TGGGTGGTAG TCTCTGGTGT TGCTAAGGTG ACTTGTGGTG ATGATGAGGT TTTACTAGGT
CGTAATCAGT CAACTTATGT ACCAGCAGCA ACACTACATA AAGTAGATAA CCCTGGGTCT
ATCCCGTTAG TAATTCTAGA AATTCAAAAT GGGGAATATT TAGGGGAGGA CGATACTGAG
CGTCCCTATG ACTTAAATTT AGTTAAGCCT GGGGTTGAGA TTAAGTAG
 
Protein sequence
MTQSENNGQL DANDSSSHSG LRYWGNVEVI EEGESYRISR IEIKPRHGIK PQIHYHRNEH 
WVVVSGVAKV TCGDDEVLLG RNQSTYVPAA TLHKVDNPGS IPLVILEIQN GEYLGEDDTE
RPYDLNLVKP GVEIK