Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1393 |
Symbol | |
ID | 3682687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1720009 |
End bp | 1721127 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637716730 |
Product | hypothetical protein |
Protein accession | YP_321911 |
Protein GI | 75907615 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00484558 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.314593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTAA ATGCTATGGC AATGACTCTG TTGGTCTCAC TGGCTGCGGC GCAGAGTGCA TACGCCCAAG ACACTGCCAT CACAGGCCAG CCATTCATGC GGGCAGCCCT CACTGTGATG ACTTTCGACT ACTTCGCTAC GAAATGCAAG CAGGGTCGGG GCTTTGTTCC TGCCGACTCT GCCAAGATCG AGGCATGGCA AACCGCGAAC GGTGTCAATC AGATTCGTCT CCGGATGCGT GACCTCGATC GCTACCCCTC CCAAAAGCAG GAAATCAACC AGGCTTTTGC ACAGATCACC GAAAAGGTAA CATCTCAGAA TACCAATATC GATGCTTGTG CTGTAGCACT TTCTATATCG AAACTGCCTG ACTCACAGTT TGCTACCGTA TCTCCCCAAC TGCTCGCACA AACGAGTAGT CCAGCCAAAA AACCTCAGAG GGGCGCTCAG AGGTCTGTTA GCACTCCTGT GAGTGTTACT TCTGGATCGA ATGCCAAAAT TGCGGCTCAG ATCGATAGTT TTGGTTTTAA TTCGCGTCCA ACAATAGGTA TCGGTGGTTT TGTCGCCATC GACATCTATC CTGTCGTCCT TTTTCGCAAC GGTGATGCCC TCACTGATGT GGAAGGACTT TCATTTCCAG GTGGACTCGA AGCCCACAAA CGCCTAAAAC CGGACAACTG GACGCGTTGG CGTCGTCAGG GTGGCGAATT GCAACTTGCA CAAAAGGGCG GCTGGAAGGC GTTACCTTTT CGGACGACTT ATCCCAAATT ACCGGACAAC TTCAAGCTCG ACGGACTCTT TCGCTCTCTC TCTGGTACAG GTACAGTGGC GATCGGGGGT AGCCAATCCC TAGCTGTATG GCAAGACTAT CGGTTCTCGG CTGATGGTCG AGTTGTGCGT GGTAACGGTG CTGGTGGAAG TGCAGAAGCT GGCGACGTAG CGATCGCCAC CAGCAACATA GCACCAAATC GCCGTGGTCG CTATCGTGTC CAAGGGATGA CGCTACATAT CACCTATGAT GATGGCTCCA GGGAGAGTCG CATCCTAATT ACCGATCCAA AAGATCCCAA GAGTGCGATT TGGCTCGATG GGGTGAGCTA CGTCCGCCGA AAGCAGTAA
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Protein sequence | MRVNAMAMTL LVSLAAAQSA YAQDTAITGQ PFMRAALTVM TFDYFATKCK QGRGFVPADS AKIEAWQTAN GVNQIRLRMR DLDRYPSQKQ EINQAFAQIT EKVTSQNTNI DACAVALSIS KLPDSQFATV SPQLLAQTSS PAKKPQRGAQ RSVSTPVSVT SGSNAKIAAQ IDSFGFNSRP TIGIGGFVAI DIYPVVLFRN GDALTDVEGL SFPGGLEAHK RLKPDNWTRW RRQGGELQLA QKGGWKALPF RTTYPKLPDN FKLDGLFRSL SGTGTVAIGG SQSLAVWQDY RFSADGRVVR GNGAGGSAEA GDVAIATSNI APNRRGRYRV QGMTLHITYD DGSRESRILI TDPKDPKSAI WLDGVSYVRR KQ
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