Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1384 |
Symbol | |
ID | 3682815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1705420 |
End bp | 1706742 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637716722 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_321903 |
Protein GI | 75907607 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0293662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAGCA AATTAAGGCT TTCAAACTTA TCTAAATTAA AATCTCATTC TCGCTTGCGT GCCATCATTG CTAATACTGG TTGGTTGTTT GCCGATCGCA TCCTGCGTAT GGGTGCAAGC CTGGTGGTGG GAGTATGGAT AGCACGCTAT TTAGGAGCGC AACAGTATGG TCTGTTTAAC TATGCGCTAG CCTTTGTGAC TTTATTTACT CCTGTTTTGA CTTTGGGTTT AGATGAAATA GTGGTTCGCC ATGTGGTACG TGAATCATCA AATAAAGAGG AGATTTTAGG AACCACGTTT TGGCTAAAAT TTCTCGGAGG GATTGCCTCT GTATTATTAG CAGTTGGTAT TACGCTATTC TTGGGTGAAC GGGAATTTTT GAAGATATCC TTAGTGGCTA TTTTAGCAAT AGCGGGAATT TTTAGGGCGG CGGATACTAT TGAATTATGG TTCCAGTCGC AGGTGCAGTC AAAATATGCT GTTATTGCTA AAAATATAGC TTTTTTATTA AATACGCTGA TCAAAGTAGC CCTAATTTTA ACAAAAGCAC CATTATTAGC ATTTGCTTGG GTAACCTTGG CAGAATTTGC CATGAATGCA GTTGGTTTAG CTATTGTTTA CCAATCTAAA GGATTTTCAT TTTGGTCATG GCGTTGGAAT TTTCAGGTTG CGAAAACACT CCTCAAAGAG AGTTTACCTT TAATTTTTTC CGGCTTTGCC ATCATGATTT TTATGAAAAT TGACCAGATC ATGTTGGGTC AAATGATTGG GGATAAGGAG GTAGGGGTTT ATTCTGCGGC TGTGCGGATA TCGGAAGTTT GGTACTTTAT TCCAGGTGCG ATTGTCCCTT CTGTAGCTCC ATCAATCTAC GCAGCGAAGG ATCAATCAGA CGGGGTTTAC TATCAGCGTC TAGGACAGTT GTTTCGGCTA CTAACTTGTA TAGCTTTGGC GATCGCTGTG CCAATGACTT TCCTTTCTGA CAAAATAATT ATGGTGTTGT TTGGTAATGG ATACGCAGGC GCTGGTGCAA TACTCGCCGT ACATATTTGG ACTTCTATAT TTGTATTCCT TGGTTTTGCA TCATCACCTT GGTTTATTGC CGAAGGTTTG AATCATGTAA CTCTAGGTAA GACTGTATTT GGGGCTATAT TGAACATTAT TCTCAATTTC CTGCTGATTC CCCAATATTT AGGACTAGGT GCAGCGATCG CCACAATTAT ATCCCAAGCT GCGGCAGCTT TCCTTTGCAA TGCTTTCGAT AGAAGAACAC AAAAAATATT TAAGATTCAA TTGCAGTCAC TTCTGCTGTT CTATAAATAT TAG
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Protein sequence | MLSKLRLSNL SKLKSHSRLR AIIANTGWLF ADRILRMGAS LVVGVWIARY LGAQQYGLFN YALAFVTLFT PVLTLGLDEI VVRHVVRESS NKEEILGTTF WLKFLGGIAS VLLAVGITLF LGEREFLKIS LVAILAIAGI FRAADTIELW FQSQVQSKYA VIAKNIAFLL NTLIKVALIL TKAPLLAFAW VTLAEFAMNA VGLAIVYQSK GFSFWSWRWN FQVAKTLLKE SLPLIFSGFA IMIFMKIDQI MLGQMIGDKE VGVYSAAVRI SEVWYFIPGA IVPSVAPSIY AAKDQSDGVY YQRLGQLFRL LTCIALAIAV PMTFLSDKII MVLFGNGYAG AGAILAVHIW TSIFVFLGFA SSPWFIAEGL NHVTLGKTVF GAILNIILNF LLIPQYLGLG AAIATIISQA AAAFLCNAFD RRTQKIFKIQ LQSLLLFYKY
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