| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1352 |
|---|
| Symbol | |
|---|
| ID | 3682861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 1667483 |
|---|
| End bp | 1669942 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637716690 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_321871 |
|---|
| Protein GI | 75907575 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0364534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0483698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA CTATAGAACG CCAAGCGGGT GGCTTATATG CTCAAACTCC TGAACAACAG
CAAATTGCTT TCCCCCTGAA GCACACTGAA GTACAAGCTA AAATTGCGGG GAATATTTCA
CGGGTGGAAG TTACCCAAAG TTTTGAAAAT CCTTTCACAA CTACACTAGA AGCTGTTTAT
ATTTTTCCGT TACCGGATGA GGCGGCTGTT GATGATATGC TGATTCGGAT TGGTGACAAG
ACTATTAAAG GTAGTATTAA AAAACGCCAA GAAGCACAGC AAATATACGA GCAAGCGAAG
GAACAAGGAC GCACCGCCGG ACTGTTGGAA CAAGAACGGG ACAATATTTT TACTCAATCC
CTCGCCAACA TTCAACCAGG TGAGCAAATT GATGTGATTA TTCGCTACTC TGAAAGTTTG
AAATTTACGG CGGGTAATTA TGAGTTTGTT TTCCCGATGG TGGTTGCTCC CCGTTACGTT
CCAGGGATAC CAATTGAGGG AAATGCGGTT GGTGTTGGTT CGGCTACTGC ACCGATGACG
CAAAATCAAG ATACAGATAT CGTCCCCGAT GGTTCACGGT TGAATGCACC TATCTTACCA
TCGGGTATGC GATCGCCTCA CGATATTAAT GTCACCATAG AAATTGATGC AGGGGTTGAG
GTGCAAAATA TCCAGTCTCC TTCTCACCAA GTTCAGATAA GTTATGCAGA AAAGCGGGTG
TTGGTGAAGT TGGCGGGTGG GGATACTATT CCGAATAAAG ACTTGATTTT ACGTTATCAA
GTAGCTGGCG AATCTACTCA AGCGACGGTA CTCAGCCAAG CTGATGAACG GGGTGGACAT
TTTGCACTAT ATCTAATTCC TGCACTCCAG TATCGTCAGA ATCAGATTGT TCCTAAAGAT
GTGGTGTTTC TCATCGATAC TTCCGGTTCA CAAATGGGTG CGCCATTGAT GCAATGTCAG
GAGTTGATGC GCCGCTTTAT TAATGGACTT AATCCTGATG ACACTTTTAG TATTATTGAT
TTCTCTGATA CGACTCGGCA ATTATCGCCT GTTCCTCTGG CTAATAATTC TCAAAATCGC
ACACGCGCCA TTAATTATAT TAATCGATTG ACAGCTAATG GCGGGACGGA GATGTTACGC
GGGATTCGTG CTGTGTTGAA TTTCCCAGTT ACAGATTCTG GACGGTTGCG GAGTATTGTA
TTGTTAACGG ATGGTTATAT TGGCAATGAA AACCAAATTC TTGCCGAAGT GCAACAACAT
CTGCAAGCAG GAAACCGCCT TTATAGTTTT GGTGCGGGTA GTTCAGTAAA TCGTTTTCTA
CTCAACCGCA TTGCAGAATT AGGACGGGGG ATAGCACAGA TAATTCGCCA CGATGAACCA
ACGGATGAGG TAGTCGATAA ATTCTACCGT CAAATTAACA ATCCTGTTTT GGCTAACATT
AATTTGCAAT GGGAAGGCGA TGGTAATGCG CCAATTATCT ATCCTGCCAC GCCACCAGAT
TTGTTTGCGG AACAGCCGTT AGTTTTATTT GGTAAAAAAC CTGATGCGCG TGGGGGAAAA
CTCCACATTA CGGGAATTGT TGCCGGTGGT ACACGCTACC AAAATACGAT AAAACTGGAC
TTTGAGGAAA CAGGAAACCC CGCTATTGCT CAACTTTGGG GACGTTCCCG CATCAAGGAA
TTGATGAATA AGATGGTGAG TGGTGATACT AAGTTGGGTG TGGAAGGGGT GACAGATACG
GCTTTGACTT ATCAACTGTT GTCACAATAT ACAGCTTTTG TGGCGGTGAG TGATGATGTG
CGAGTTGATT CACGTCAGGG TTCAGTTTCG GTGCAAGTAC CTGTAGAAAT GGCTGAAGGT
ATGAGTTATC AAGGTATTTT TGGGAGTGCT GTTACTGCTG CTGCGCCTCC TCCCATCATG
GCAAATATGG TGTCTCCTGC GCCTGAGTTT TTGCAACGTA AGCGCAGCCT AGCATCTCCA
AGCGCACCAC AAGCAGAAAG TGGTTTTTCT GAACTACCCT CATTAACGGA ACTAAGTGAA
GATGCGAAAA TTGAATTATC ATTCAGTGAT CTCGATTACA CTTTTAGGGA ACCACCCCCA
AAACCTAGAC AACAAGCTTC CAGTGGTTGG AATAAATATT TTGAGGATAT AGACTCATCA
CAGGAAATTA CTCCTGTTGG AATTTTGCAG GTTGTGAATG TAATAGGATT GAACTACCAG
ATGATTGTGA TTCTGACTCG TTATTTAGAA TCTCTCCCAT TACATACAGA TTGCAGTGGG
GATTTAGTGT TGGAGTTGCA GATAAATAAG GGACGAGTGA GACAGGTGTT GTTAGATGAA
GAAGCTTCTA CTTTTAAGGA ACAATCTGTG ATTGATATTA TCAGGCGATC GCTCATCTCC
TGGCAACCCC CTCAAATGCT CACAGCTACC GTGTCTTTAA CGCTGCGATT GCAAGCATAA
|
|---|
| Protein sequence | MTQTIERQAG GLYAQTPEQQ QIAFPLKHTE VQAKIAGNIS RVEVTQSFEN PFTTTLEAVY
IFPLPDEAAV DDMLIRIGDK TIKGSIKKRQ EAQQIYEQAK EQGRTAGLLE QERDNIFTQS
LANIQPGEQI DVIIRYSESL KFTAGNYEFV FPMVVAPRYV PGIPIEGNAV GVGSATAPMT
QNQDTDIVPD GSRLNAPILP SGMRSPHDIN VTIEIDAGVE VQNIQSPSHQ VQISYAEKRV
LVKLAGGDTI PNKDLILRYQ VAGESTQATV LSQADERGGH FALYLIPALQ YRQNQIVPKD
VVFLIDTSGS QMGAPLMQCQ ELMRRFINGL NPDDTFSIID FSDTTRQLSP VPLANNSQNR
TRAINYINRL TANGGTEMLR GIRAVLNFPV TDSGRLRSIV LLTDGYIGNE NQILAEVQQH
LQAGNRLYSF GAGSSVNRFL LNRIAELGRG IAQIIRHDEP TDEVVDKFYR QINNPVLANI
NLQWEGDGNA PIIYPATPPD LFAEQPLVLF GKKPDARGGK LHITGIVAGG TRYQNTIKLD
FEETGNPAIA QLWGRSRIKE LMNKMVSGDT KLGVEGVTDT ALTYQLLSQY TAFVAVSDDV
RVDSRQGSVS VQVPVEMAEG MSYQGIFGSA VTAAAPPPIM ANMVSPAPEF LQRKRSLASP
SAPQAESGFS ELPSLTELSE DAKIELSFSD LDYTFREPPP KPRQQASSGW NKYFEDIDSS
QEITPVGILQ VVNVIGLNYQ MIVILTRYLE SLPLHTDCSG DLVLELQINK GRVRQVLLDE
EASTFKEQSV IDIIRRSLIS WQPPQMLTAT VSLTLRLQA
|
|---|
| |