Gene Ava_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1350 
Symbol 
ID3682859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1662921 
End bp1665002 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content38% 
IMG OID637716688 
Productdynamin 
Protein accessionYP_321869 
Protein GI75907573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0228271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTAATC AAGTAGCAAC TGATAAATTT ATTCAGGATT TAGAACGTGT TTCTCAAGTG 
CGTTCTAAGA TTGCCATCTC TTTACAAAAA TTATCTGACA CAATTAATCA AGCTGAATTA
GCTGGAGATA CATCATCAGG TAAGCTGAGT TTAGAAAGAG ATTTAGAAGA TATTTCTGTA
GCAAGTAATA ATCTAAAAAA AGGAGTATTT CGCTTATTGG TTTTAGGCGA TATGAAGCGG
GGTAAAAGTA CATTTCTTAA TGCCTTGATT GGAGAGAATT TATTACCAAG TGATGTTAAC
CCCTGTACCG CAGTTTTAAC AGTATTACGC TACGGAGCAG AAAAAAAAGT TACAATTTAC
TTTAATGATG GCAAAAGCCC ACAAACATTA GATTTTCCCA GCTTTAAATA TAAATACACT
ATTGACCCGG CGGAAGCAAA GAAGTTAGAA CAAGAGAAAA AATCAGCTTT TCCTGATGTT
GATTATGCAG TTGTAGAATA TCCTTTAAGT CTACTAGAAA AGGGTATTGA AATTGTTGAT
AGTCCTGGGT TAAATGACAC GGAAGCGCGC AACGAATTAT CTTTGGGATA TGTCAATAAC
TGTCATGCAA TTTTATTTGT CATGCGAGCT TCCCAACCTT GTACTTTAGG AGAGCGTCGT
TATTTAGAAA ATTATATCAA AGGTCGGGGT TTATCTGTTT TCTTCTTAAT TAATGCTTGG
GATCAAGTAA AGGAATCATT AATTGATCCT GATGATGCGG AGGAGTTAAG AGCATCGGAA
GATAGGCTAC GACAAGTATT TAAGGCGAAC TTGGCAGAAT ATTGTTATGT AGATGGTCAA
AATATTTATG ATGAGAGGGT GTTTGAACTG TCATCAATTC AAGCATTGCG GCGACGGTTG
AAGGATTCCC AAGCAGATTT AACTGGAACT GGTTTTTCTG AGTTTATGGG TTCCCTAAAT
ACATTTCTTA CCAGAGAACG GGCGATCGCA GAACTACGAC AAGCCAGAAC ATTAGCCAGA
CAAGCTGTCA ACCATACCCG CGAAGCAATT GGAAGACGCT TACCGTTACT AGACAAAGAT
GTTGATGAAT TAAAAAAACG AATTGATTCT GTTGAACCAG AGTTTACTAA ACTAAATAAT
ATTCGTGACC AATTTCAAAA GGAAATTTTT ACTACTAGGG ATACTCAAGC GCGCAAAGTT
TCGGAATCTT TCCGCAGTTA TGTTTTAAAT TTGGGTAATA CTTTTGAAAC TGATTTTTTA
CGTTATCAAC CAGAGTTAAA TTTGTTTGAT TTCTTGAGTA ATGGTAAGCG AGAAGCTTTT
AATGCTGCGC TACAAAAAGC TTTTGAGCAA TACATTACTG ATAAGTTTGC AGCGTGGACT
TTAACCGCAG AAAAAGATAT TAATGTGGCG TTTAAAGAAC TTTCTCGCAG TGCATCTCAA
TATGGTGCAT CTTACAGCCA AGTAACTGAC CAAATCACCG AAAAACTCAC GGGACAAAAA
GTTACGGTTA GTCCTACAAC TACCACAGAA GATGATAAAT CTCCTAGTTG GGCAAAATGG
GCAATGGGAT TGTTATCTTT GTCTCGCGGA AATTTGGCGG GTGTGGCGTT AGCTGGTGCT
GGGTTTGATT GGAAAAATAT TTTGTTAAAT TACTTTACTG TAGTTGGGAT TGGGGGGATT
ATTACAGCCG TTACAGGGGT ACTTCTCGGC CCCATTGGAT TTGCTTTACT TGGTTTGGGT
GTAGGTTTTT TACAAGCAGA CCAAGCGCGG AAAGAGTTAG TGAAAACTGC TAAGAAGGAG
TTGGTGAAAT ATTTACCGCA GGTGGCCCAT GAACAATCGC AAACTGTCTA TGATGCGGTG
AAGGAATGTT TTGATGCTTA TGAAAGGGAA GTAAGTAAGC GGATTAATGA TGATATTACT
GCGCGGAAGT CGGAGTTAGA TAATTTACTG AAGCAGAAGG AAACACGGGA GATTAATCGG
GAGGGTGAGT TGAAAAGGTT TAAGAGTTTG CAGGAGGATG TGATTACTCA ATTGCAAAAT
ATTGAGGCTG CTTATGGTAA TTTGTTGGCT TATTATGGCT AA
 
Protein sequence
MVNQVATDKF IQDLERVSQV RSKIAISLQK LSDTINQAEL AGDTSSGKLS LERDLEDISV 
ASNNLKKGVF RLLVLGDMKR GKSTFLNALI GENLLPSDVN PCTAVLTVLR YGAEKKVTIY
FNDGKSPQTL DFPSFKYKYT IDPAEAKKLE QEKKSAFPDV DYAVVEYPLS LLEKGIEIVD
SPGLNDTEAR NELSLGYVNN CHAILFVMRA SQPCTLGERR YLENYIKGRG LSVFFLINAW
DQVKESLIDP DDAEELRASE DRLRQVFKAN LAEYCYVDGQ NIYDERVFEL SSIQALRRRL
KDSQADLTGT GFSEFMGSLN TFLTRERAIA ELRQARTLAR QAVNHTREAI GRRLPLLDKD
VDELKKRIDS VEPEFTKLNN IRDQFQKEIF TTRDTQARKV SESFRSYVLN LGNTFETDFL
RYQPELNLFD FLSNGKREAF NAALQKAFEQ YITDKFAAWT LTAEKDINVA FKELSRSASQ
YGASYSQVTD QITEKLTGQK VTVSPTTTTE DDKSPSWAKW AMGLLSLSRG NLAGVALAGA
GFDWKNILLN YFTVVGIGGI ITAVTGVLLG PIGFALLGLG VGFLQADQAR KELVKTAKKE
LVKYLPQVAH EQSQTVYDAV KECFDAYERE VSKRINDDIT ARKSELDNLL KQKETREINR
EGELKRFKSL QEDVITQLQN IEAAYGNLLA YYG