Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1330 |
Symbol | |
ID | 3682917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1640235 |
End bp | 1642952 |
Gene Length | 2718 bp |
Protein Length | 905 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716668 |
Product | integrase catalytic subunit |
Protein accession | YP_321849 |
Protein GI | 75907553 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACG ACGAATTTGA TTATTGGTGT AAGCAACAGC AACTAACGGC ATCCTGCAAA GACTTAATCG CCGCAATTCG CGCTGCGCCA CCTTCTCGCA GAGTACAAGG ACGCGCCAAG AACGTTAGTG GAGTTTACCC TAGCCGTAAA ATGGGTCAAA CCATTCAATT TGAGAGCCAC ACAGTAGAAC TGTGGGCGAT TTATCAAATG GAACATGACC CCCAGGTGTT AGAGTACTAT GATCAACCAC CGCCATTTAA AATTCAGTAC CAAAACCAAA ACGGGCGAAA AATAGGTCAT TATCATACCC CAGACTTCTT CGTACTGCGT TCAAGTGGTG CAGCCTGGGA AGAATGGAAA ACCGAAACCG AATTAAAACG ACTAGCCCAA AAATACCCTT CACGCTACCA AAAAACCGAA ACTGGTCATT GGCATTGCCC ACCAGGAGAA GCTTATGCCG CATCATTTGG ACTCAAATAC CATGTTCGTA CCGATACCGA ACTAAATCCC ATATTCACTC AAAACCTAAT GTTTTTAGAA GATTACTTTA GGTTCAGTGC CAATATCCCC CACTCCATTA CAGAACAAAT CTCTTCAGCA GTTCAAGCCA CTCCAGGAAC AACCATAGCC ACTACACTTG CAACCATACC TGGAGTGCGT GCCAACGATA TCTACGCCAT GATTGCCACA GAGCAACTCT ACGTAGACTT GTATGCAGTT CCCCTAGTGG AGCATTGGCG AGTTCAATTA TGGGCAGACC AACAAACTCA TACTGCTCAT ACACATTTAG CCATAGGGAC AACTGGGCAT CATCAACAAA TCATCTCGCC CACAACACTT TTGCCCAATA CCTTATTAGT CTGGGACGCA CAACTTTGGA CTTTAGTTAA CTTGGGCGAG AAGACAACCA CACTTTTACC TGAAGTCGGG CAACCAATGC AACTGCCCAC AGCATTTTTT CTGCAATTAT TTGATAGCGG CACTATCAAA ATTCATACTT CAGAAACACA CACAACCATC AATGAAAAAG TGCGTGAATT GATGGATGCC GCCTCGCCTA CGGATCTAGA AAGAGCTAAT CACAGATTTC ATCTAGTACA AGCATATTTC CAGCACCGCA CAGACATATA TAAGGACATA CCTCAAAGCA CCTTGTCTCG ATGGGTCAAA CAGTTTCGGG AAGCAGAAGC CACTTTTGGT TGCGGTTATG TTGGTTTGCT CCCACGTACC GCTAGTAGAG GAAATCGCCT ACCCAAAGCA CCAACAGATG CAAGCAAATT ATTAGATCAA TTTATTACCG AACACTTTGA GACACCAAGA CAAGCCCCAG CCGCTTCCGT TTATCGCGCC TATACAAGAG CCTGCTGTGC TGCCAACATC CCACCACTGA GTCAGCGCAC ATTTTATACT CGCCTAAAAA AGCGTCCCAT CCATGAGCAG ACTTTAAAAC GTCAGGGGGC AAAAGCCGCA TACGCAACAG AACCGATTGT TTTAGAACTA GCTAAAACTA CACCCAGGCA TGGAGACAGA CCCTTTGCTA TCTGCCATCT TGACCACACC CAACTCGATA TCGAATTACG TTCCCAAGTA ACTGGTCGGA ACTTAGGACG ACCTTGGCTG ACATTACTGA TTGATGCCTA CTCCCGACGC ATCTTAGCAG TTTATCTTAC CTTTGACCCA CCTTCTTACA GGTCTTGCAT GATGGCACTA CGGTTGTGTG TCCAGCGTGA GGGTCGTTTT CCCCAATCCG TAGTTGTAGA TGGCGGCAAG GAATTTCATA GCGTTTACTT TGATACCTTA TTAGCACGTT ACCACTGCAT TAAAAAGACA AGACCCGGTG GTAAACCTCG TTTTGGCTCA GTAGTTGAGA GATTATTCGG CACAACCAAT ACTGAATTTA TCTTTAACTT ACTGGGCAAC ACCCAAGCCA GTAAGCAGCC GCGTCAACTT ACTTCCTCTG TTGACCCCAA ACAACTTGCC GTTTGGACAT TGGCAGATTT ATATACCTAC CTGTGTGAGT GGGCATACAC CATTTATGAC ACGAGCATAC ATGATTCCTT GGGTGAGACA CCATTACAAG TTTATACCGA CGCTATTGCT GCCACTGGGG AGAGGGAACA CCGACGCATT GCATACAACG AAGACTTCCT CATGGCAACA CGCCCTAGTA CACCCAAAGG CAACGCTAAA GTCCAGCCTG GACAGGGAAT AAAAGTCAAT TATCTTTATT ACTGGAACGA TGCTTTCCGC AATCCGGTTG TCGAAAAGAC CAAAGTCAGT GTGCGCTATG ACCCTTTTGA TATGGGTGTA GCTTATGCGT ACTTAGAGGG AAGATGGGTC AAATGTATCT CCCAGTATTA CAGCACCTTT GCCGGACGCA CGGAGAAAGA AGTGCTATTA GCTGCCCAAG AAATTAGACA ACAAGATAAG CGTAATGCTG TGAGTACAAA TATCTCTGCC AAACGCCTTG CCGACTTCAT CGCGGCGGTG CAAGAACATG AAACCTTGCT CATGCAACGG TTACGGGATT TGGAAGCGGT TGGGGTACTA GAGAATGTAA CACCCAATAC TGAAGGTGTA TCCCAGTTCC CAAGAGTCAG CACTCTTGAG CCGACTATGG AAGCACACAG TCAAAATGAC GAACAATTGC CACCACTGCA AAACAACGTT GAACTGTTGG ATCTCACACA ACTGCCGATA CTAGGGGAAT ACCGTTAA
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Protein sequence | MTDDEFDYWC KQQQLTASCK DLIAAIRAAP PSRRVQGRAK NVSGVYPSRK MGQTIQFESH TVELWAIYQM EHDPQVLEYY DQPPPFKIQY QNQNGRKIGH YHTPDFFVLR SSGAAWEEWK TETELKRLAQ KYPSRYQKTE TGHWHCPPGE AYAASFGLKY HVRTDTELNP IFTQNLMFLE DYFRFSANIP HSITEQISSA VQATPGTTIA TTLATIPGVR ANDIYAMIAT EQLYVDLYAV PLVEHWRVQL WADQQTHTAH THLAIGTTGH HQQIISPTTL LPNTLLVWDA QLWTLVNLGE KTTTLLPEVG QPMQLPTAFF LQLFDSGTIK IHTSETHTTI NEKVRELMDA ASPTDLERAN HRFHLVQAYF QHRTDIYKDI PQSTLSRWVK QFREAEATFG CGYVGLLPRT ASRGNRLPKA PTDASKLLDQ FITEHFETPR QAPAASVYRA YTRACCAANI PPLSQRTFYT RLKKRPIHEQ TLKRQGAKAA YATEPIVLEL AKTTPRHGDR PFAICHLDHT QLDIELRSQV TGRNLGRPWL TLLIDAYSRR ILAVYLTFDP PSYRSCMMAL RLCVQREGRF PQSVVVDGGK EFHSVYFDTL LARYHCIKKT RPGGKPRFGS VVERLFGTTN TEFIFNLLGN TQASKQPRQL TSSVDPKQLA VWTLADLYTY LCEWAYTIYD TSIHDSLGET PLQVYTDAIA ATGEREHRRI AYNEDFLMAT RPSTPKGNAK VQPGQGIKVN YLYYWNDAFR NPVVEKTKVS VRYDPFDMGV AYAYLEGRWV KCISQYYSTF AGRTEKEVLL AAQEIRQQDK RNAVSTNISA KRLADFIAAV QEHETLLMQR LRDLEAVGVL ENVTPNTEGV SQFPRVSTLE PTMEAHSQND EQLPPLQNNV ELLDLTQLPI LGEYR
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