| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1236 |
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| Symbol | |
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| ID | 3683174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1521997 |
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| End bp | 1523529 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716574 |
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| Product | retinal pigment epithelial membrane protein |
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| Protein accession | YP_321755 |
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| Protein GI | 75907459 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0229916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA ATCCTTTCTT AAAGCCTACC TTTTTTAATA TGCAAAGTTA CAAATATCAA
CAAAAAGAAA CTTCAGAAAA ATCATATACT CGTGAAGACT GGCAGGGAGG ATATAAATCT
CTAACGCAAG AGTTTGATTA TTGGATTGAT GATGTAGAAG GGGAAATTCC TGCCGAACTA
CAAGGTACTT TGTTTAGAAA CGGGCCAGGA TTACTAGATA TCAAAGGACA AAGTATTCAT
CACCCCTTTG ATGGTGATGG CATGATTAGC CGTATTAGCT TTGTCAATGG TCGCGCTCAT
TACCGTAATA GTTTTGTCAA AACAGCAGGG TATTTGGCAG AAAAAAATGC TGGTAAAATT
CTGCATCGGG GAGTTTTTGG TACTCAAAAA CCGGGTGGTT GGTTAGCTAA TATATTTGAT
TTCAAACTGA AGAATATTGC TAACACTAAT GTTATCTATT GGGGTAATAA ACTTTTAGCA
TTGTGGGAGG CGGCGGAACC CCATCGTCTT GACCCCAAAA CGTTAGAGAC ATTGGGTAAA
GAATATTTTG ATGATGTTTT GTCAGCAGGT GAAGCTTTTA GCGCTCATCC CCGATTTGAC
CCCAGTTGTG AGCAGGATAA CGGCGCACCT TGCTTAGTCA ATTTTTCGGT TAAACCCGGA
TTATCTACGA AAATTACGAT TTTTGAGTTA AATCTAGCAG GCGAAGTTGT CAGAAAGCAC
GCTCACAATG TACCTGGGTT TTGTTTTATT CACGATTTTG TAATTACACC TAATTACTGC
ATCTTCTTTC AAAATCCTGT TAGCTTTAAC CCTATACCTT TCGCCTTAGG ATTACGTGGC
GCTGGGGAAT GTATTCAAGT AAAACCAAAT CAGCCAACAC GGATTATTAT CATTCCTCGC
TTTCCTCAGT CAGGACAAAA AGAAATCAAA ACTTTAGAAG TGCGTTCAGG TTTCATTTTC
CATCACGTTA ATGCTTTCGT TGTGGGAGAT GAAATTCTTG TAGACTCAAT TTGTTATGAC
TCCCTACCAG AAGTAGAGCC AGAAAGTGAT TTTCGCCAAG TGGATTTTGA GGCGATCGCA
CCTGGTCAAC TATGGCGTTT TTACCTTAAT CTCAAGGATG GGACAGTACA AAAAAAATTA
ATTGAATCTC GTTGTTGTGA GTTTCCCGCA ATTCATCCCC GTAATGTAGG GCGTTCTTAT
CGATACTTGT ATATGGGTGC GGCTCATAGG GATAGTGGTA ATGCACCATT GCAAGCATTA
CTGAAAATAG ATTTAGAGTC TGGAGAAAAA CAGATATGGA GTGCAGCACC TCGCGGTTTT
ACGGGTGAGC CGATTTTTGT TCCCCGTCCA GGCTCAGAAA AAGAGGATGA TGGTTGGGTA
CTGGCTTTAG TTTATGATGC GGCTCATCAC CGTTCAGATG TGGTAATTTT AGATGCTAGT
GATTTTACTA AAGGGGCGAT CGCTAGGCTA CATCTCCAGC ATCATGTACC CTATGGTCTT
CACGGCAACT TTACTCCCCA GGTATTTGTA TAA
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| Protein sequence | MQNNPFLKPT FFNMQSYKYQ QKETSEKSYT REDWQGGYKS LTQEFDYWID DVEGEIPAEL
QGTLFRNGPG LLDIKGQSIH HPFDGDGMIS RISFVNGRAH YRNSFVKTAG YLAEKNAGKI
LHRGVFGTQK PGGWLANIFD FKLKNIANTN VIYWGNKLLA LWEAAEPHRL DPKTLETLGK
EYFDDVLSAG EAFSAHPRFD PSCEQDNGAP CLVNFSVKPG LSTKITIFEL NLAGEVVRKH
AHNVPGFCFI HDFVITPNYC IFFQNPVSFN PIPFALGLRG AGECIQVKPN QPTRIIIIPR
FPQSGQKEIK TLEVRSGFIF HHVNAFVVGD EILVDSICYD SLPEVEPESD FRQVDFEAIA
PGQLWRFYLN LKDGTVQKKL IESRCCEFPA IHPRNVGRSY RYLYMGAAHR DSGNAPLQAL
LKIDLESGEK QIWSAAPRGF TGEPIFVPRP GSEKEDDGWV LALVYDAAHH RSDVVILDAS
DFTKGAIARL HLQHHVPYGL HGNFTPQVFV
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