Gene Ava_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1227 
Symbol 
ID3683267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1512312 
End bp1513124 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content39% 
IMG OID637716565 
Producthypothetical protein 
Protein accessionYP_321746 
Protein GI75907450 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.71793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACTG ACACCCTTTT TTATAGCCTA TTTCAGACTT TCCCCAATGT ATTTTTTGAA 
TTAATTGGTC AACCGGAAAC TGATACTAGC GGCTATCAAT TCACATCCAT TGAACTTAAA
CAACAGTCTT TTCGTCTAGA CGGGGTATTT TTACCCATAT CTGGCAACCC TAATCAACCA
ATCTACTTTC TGGAAGTGCA GTTTCAGAAA GACGAAGCTT TCTACCAGCG AGTTTTTGCC
GAAATCTTTC TCTATTTATA CCAGTATCAG CCAGCAAATG AATGGCGTGC TGTGGTTATC
TTTCCCAGAA AGAGTGTGGA ACCGAAAGAA CCTAGACCTT ATCGCTTTTT ACTCAACAGT
TCCCTAATAC AACGAGTTTA TTTAAATGAA CTGGGAAAAA CTGACAATAC CTCAATCGGT
GTTGGTATTG TGCAGCTAAT TGTGGAAAGC GAAAGTGAAA CAGCCGGAAA AGCTAAACAA
CTAATTGGGC AAGCTAAACA GCAGTTAACG GATGCGCTTA CCCAGCAAGA AATTATAGAA
TTTATTGAGA CAGTAGTAAT TTATAAGTTT CCCAGACTTA GCAGGGAAGA GGTAGAAACT
ATGTTGGGTT TGGATGCTAT TAGGAATACA AAGGTTTATC AAGAGGCAAA AGAGGAAGGT
AAACTCGAAG GTAAACTCGA AGGTAAACTG GAGGGTAAGC TTGAAGCAGT GCCTAAGTTT
TTGAAATTGG GATTGAGTGT AGAACAAATC GCTGAGGCTT TGGAATTAGA AGTTGATTTG
GTCAGACAAG CCGCAGAACA ATCGTCTTCT TAA
 
Protein sequence
MKTDTLFYSL FQTFPNVFFE LIGQPETDTS GYQFTSIELK QQSFRLDGVF LPISGNPNQP 
IYFLEVQFQK DEAFYQRVFA EIFLYLYQYQ PANEWRAVVI FPRKSVEPKE PRPYRFLLNS
SLIQRVYLNE LGKTDNTSIG VGIVQLIVES ESETAGKAKQ LIGQAKQQLT DALTQQEIIE
FIETVVIYKF PRLSREEVET MLGLDAIRNT KVYQEAKEEG KLEGKLEGKL EGKLEAVPKF
LKLGLSVEQI AEALELEVDL VRQAAEQSSS