| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1210 |
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| Symbol | |
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| ID | 3683309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1491763 |
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| End bp | 1494873 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637716547 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_321729 |
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| Protein GI | 75907433 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACT CTTCTACAGT AAAACCCATA CAAACAAATT CCGGGCCAGA ATCTCAACCA
GATATGAAGA CAGCTCTTTC TGGGGTAATT AGTCGGATTC GCCAGTCTTT GGACATAGAA
ACAATATTCC AAATTACCGT TACGGAAGTA CGCCAACTAT TAAATGCTGA TCGGGTAGGA
GTATTCCGTT TCTATCCTGA GTTGAGATGG GAAGGGAAAT TTATTTATGA AGATGTGGGT
TCTGAATGGA TTTCGGTATT GACATCCGAA TTCAGCGATG GATTACCCCC TACTTTAAGC
TATCACTGCT TTGCTGAGGA ATTTGCTCAA CCTTATCAGC AAGGCACAAT CAAGGTAATA
GATAATATTT ACCAAGCGGG AATTAGTGAT TATCACATTC AGAGACTGGA AAAGTTGCAA
GTACGCGCTA AGGTAGCTGC TCCTTTAATA AAAGGAAAAG AGTTGTGGGG ATTATTATGC
GTTCATCAGT GTAGTACTCC TCGACAATGG GAAGCATCAG AAATTGAGTT TGTGCAATTA
ATCGCCGAAC ATTTGGGAGT AGCTTTACAG CAAGCAGATT ATCTAGAACA GGTAAAAGCG
CAATCAGCAC AACTAGCACA AGCCAAAGCT AGAGAAACAG CCGCAGAATG GCAAAGATGT
ATGGCGATCG CTATCGAAAA AATTCGCCAA TCCCTAGATT TAGAAAGCAT TTTCCGCACT
AGTACTATAG AAATTAGAAA GCTAGTGAAT GCTGACCGCG TAGCTATTTA TCGCTTCAAT
CCAGATTGGA GTGGTGAATT TGTCTTTGAA TCTTTTGCTG ATGGTTGGAT TTCTTTGATC
GATGAACAAG AAAAGAAACC GGAATTACGA AAGAACGTCA GCGAATGTAG CGCCAAAGAT
TTAGCATCTA CCCCAACAGT AGATACTTAC TTACAAGAAA CTAGAGGTGG TAGCTTCACC
AAATGTGAAA TTTATCGTGT CTGTAATGAT ATTTATAACG CAGGCTTTAG CGACTGTTAC
ATCAAAATAC TAGAAACCTA TCAAGCTAGA GCTTACGTAA TTATTGCTAT TTACCACGGT
CAAAAACTGT GGGGCTTATT AGCAATCTAT CAAAACGCAG GAGTACGTGA TTGGCAAGAT
GATGAGGTAT ACTTACTCAC CCAAATCAGC ACCCAGTTAG GTGTAGCGTT GCAGCAAGCC
GAATATCTAC AGCAAATGCA AACTCAAGCA AGCGAAATTG CTAAAGCTGC GGAACGACAA
AGAGCATTGG CTAACACTGT AGAGAAAATT CGCCGTTCTC TTGATCTTGA TACCATCTTT
AAAACTACCA CTCAAGAAGT GCTAAGTCTA TTAGGCGTAG AACGGGTAGC AATTTATCGC
TTTTACCCAG ACTGGAGTGG TGAATTTGTC GCCGATTCCA TTGTTGATGG TTGGACACCC
ATAGTTAAGC CTCAACCTGT TACAGAACGT CTACTGCTGC AAGAAATACA AGCAGGTAAG
TATGCACGGA ATGAAGTTTT TGTTCCCATT TCCCAAGGGG ATAAGTTATG GGGTTTGTTA
GTAGCTTATC AAAACTCCCA ACCCCGTTAT TGGCAAGATG AAGAAATTAA CTTATTGGCT
CAAGTTGGTG TGCAGCTAGG TGTAGCCTTA CAACAAGCAG AAACCTTGCA ACAGTTAAAG
GTGCAAGCTG TACAATTGGC TCAAGCCGCC GCACGAGAAC GCAAAGCAGC AGAGAGAGAA
AAAGCATTAG CAGCCACAGT AGAGAAAATC CGCCGTTCTC TTGATCTTGA TACCATCTTT
GCTACCAGTA CTGAAGAAGT CCGGCGATTG TTGGAAGTTG ATCGCGTAAT TATTTACCGT
TTCCAGCCTG ATTGGAGTGG GGAATTTGTC GCTGAATCCT TGGGTAATGG TTGGACACCA
GTAAATAAAC TTCTCACTGT GATTACAGAC GATTGCTTGC AAAAAAGTCA AGGTGAATAT
TTCGTCAACG GTAAAATTCT AGTTGTTAAA GATATTTACA GCCAAGATTA TTCTAGATAC
CATCTTGCCC TCATCGAAGC GATGGAAGCC AGAGCATATA TAGTTGTGCC AATTTTCCAA
GGCGAAAAAC TGTGGGGATT ACTAGCTGCT TATCAAAATA CTCAACCTCG TGATTGGCAA
GAAGAGGAAG TAGATTTACT AGTGCAGATT GCTAATCAAT TAGGCGTAGG ACTCCAGCAA
GCAGAATTAC TCGAACAAAC ACATCGTCAA AAGGAAGAAA TCACTCAAAC ACTCAAAGAA
TTACAGGCAA CTCAAAGCCA GTTAATTCAA AGTGAAAAAA TGGCTGGTTT AGGACAACTA
GTGGCAGGTA TTGCACACGA AATCAACAAT CCAATTAGTT TTATTTACGG TAACATCACC
TATGTTACTG AACACATCGA AAATGTATTT CAATTGCTGC ATCTTTATCA AAAAAACTAT
CCTAAACCAA AAGCAGAAAT CCAAGAAAAT ATAACAGCAT TAGATTTAGA CTTTATTACT
GATGATGTAC CGAAGATTCT CAGTTCCATT AAATTTGGCG CAGAGCGCAT TTCTCAATTA
GTCTTATCAC TAAGGATTTT TGCTCGACTT AATGAAGCAG AAATGAAAAT GGTGAATCTA
CATGAAGGTA TTGATAGTAC TCTGCTGATA TTACAACACC GCTTGCAAGC AAATACTAAT
ATTTTGGAGA TTGAAGTAAT CAAAGAATAT GGTGATTTAC CTGAAATATT CTGCTATGCA
GCCCAAATGA ATCAGGTATT CATGAATATC ATCAATAATG CAATCGATGC CCTAGAAAAG
TCAATATTGA TAGGTGGAAT AGTAGATAAA CCACAAATTA AAATTAGCAC GAAATTTATC
AAGAATAATG CAGTGGTAAT TTGCATTGCT GATAATGGTT GTGGGATTCC AGAAGCGATG
CGATCGCGGA TTTTTGAACC ATTTTTTACT ACAAAAGAAC CAGGACAAGG TACTGGCTTA
GGTTTGTCTA TTAGCTATCA AATTGTTGTA GAAAAACACG GCGGGCAAAT TAAGTGTATT
TCTGAATTAG GTAAAGGTTC GGAATTTTCG ATAGAGATCC CTATCAAGTA G
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| Protein sequence | MENSSTVKPI QTNSGPESQP DMKTALSGVI SRIRQSLDIE TIFQITVTEV RQLLNADRVG
VFRFYPELRW EGKFIYEDVG SEWISVLTSE FSDGLPPTLS YHCFAEEFAQ PYQQGTIKVI
DNIYQAGISD YHIQRLEKLQ VRAKVAAPLI KGKELWGLLC VHQCSTPRQW EASEIEFVQL
IAEHLGVALQ QADYLEQVKA QSAQLAQAKA RETAAEWQRC MAIAIEKIRQ SLDLESIFRT
STIEIRKLVN ADRVAIYRFN PDWSGEFVFE SFADGWISLI DEQEKKPELR KNVSECSAKD
LASTPTVDTY LQETRGGSFT KCEIYRVCND IYNAGFSDCY IKILETYQAR AYVIIAIYHG
QKLWGLLAIY QNAGVRDWQD DEVYLLTQIS TQLGVALQQA EYLQQMQTQA SEIAKAAERQ
RALANTVEKI RRSLDLDTIF KTTTQEVLSL LGVERVAIYR FYPDWSGEFV ADSIVDGWTP
IVKPQPVTER LLLQEIQAGK YARNEVFVPI SQGDKLWGLL VAYQNSQPRY WQDEEINLLA
QVGVQLGVAL QQAETLQQLK VQAVQLAQAA ARERKAAERE KALAATVEKI RRSLDLDTIF
ATSTEEVRRL LEVDRVIIYR FQPDWSGEFV AESLGNGWTP VNKLLTVITD DCLQKSQGEY
FVNGKILVVK DIYSQDYSRY HLALIEAMEA RAYIVVPIFQ GEKLWGLLAA YQNTQPRDWQ
EEEVDLLVQI ANQLGVGLQQ AELLEQTHRQ KEEITQTLKE LQATQSQLIQ SEKMAGLGQL
VAGIAHEINN PISFIYGNIT YVTEHIENVF QLLHLYQKNY PKPKAEIQEN ITALDLDFIT
DDVPKILSSI KFGAERISQL VLSLRIFARL NEAEMKMVNL HEGIDSTLLI LQHRLQANTN
ILEIEVIKEY GDLPEIFCYA AQMNQVFMNI INNAIDALEK SILIGGIVDK PQIKISTKFI
KNNAVVICIA DNGCGIPEAM RSRIFEPFFT TKEPGQGTGL GLSISYQIVV EKHGGQIKCI
SELGKGSEFS IEIPIK
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