| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1138 |
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| Symbol | |
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| ID | 3683392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1393352 |
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| End bp | 1394182 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716474 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_321657 |
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| Protein GI | 75907361 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.283837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0213707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTTG ACAGCTGTAT TTCCGAGCAA CATACTTATC AAGTTACACA GCAGCTAGAA
AAAGAGTTGC GCCTTACTCA TTTGCTGATG GATTGTGTCA CAGATGCGGT GTTCTGGGTA
AAACCAAATG CCAGGATTTT ATATGTTAAT GATGCTGCGT GTAGTTTAGT AGGCTACTCC
CGTGAAGAAT TGCTTTGTAT GAGTATTCAA TACCTAAACT TAGAATTTTT GATGGAAGTT
TGGTTACAGC ACTGGGAAAC TATTAAACAA AAAGGGTCTT TATATTTTGA ATCTCTGTAT
AAGACTCAAG GAGGTTTAAG TTTACCCGTC CAAACTACTG TTACCTATAT GGAAGAAGAC
GGTAGGGAAT ACGGTTGCAT CTCCATCCGT GAGATTAAAA AACGTCAACC AGAGTCATTT
CAGTTGCAAC AAAATCCCAC ACTAGATATT GTTGAAACTA GAAAACCATC AGAACCTTGT
AAATCAATAT TTCCCTCTGG CTCTCAGCTA AATCAGGTCT TTAAATTTAT TGAGTCTAAC
TACAACCAAT CCATTGGCTT ACGTGACGTA GCCCAAGCAG TTGGTTACTC CCCGGCTTAT
TTAACTGATC TAGTGCGTCG GCATACAGGA GAAACGGTAA ATCATTGGAT TATTAAGCGA
CGGATGGTAG CCGCACGAAC ATTACTGCTA GAAACCGATC AATGTGTGAA TCAAATTGCT
GAAGCTGTGG GCTATCAACA CGAGGGTCAT TTCTTCCGTC AGTTTCGCCA GTACCATGAC
ACTACGCCCC ATGCTTGGCG GAAAATGCAG CGTCAGGTGG CAACATCATA A
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| Protein sequence | MVFDSCISEQ HTYQVTQQLE KELRLTHLLM DCVTDAVFWV KPNARILYVN DAACSLVGYS
REELLCMSIQ YLNLEFLMEV WLQHWETIKQ KGSLYFESLY KTQGGLSLPV QTTVTYMEED
GREYGCISIR EIKKRQPESF QLQQNPTLDI VETRKPSEPC KSIFPSGSQL NQVFKFIESN
YNQSIGLRDV AQAVGYSPAY LTDLVRRHTG ETVNHWIIKR RMVAARTLLL ETDQCVNQIA
EAVGYQHEGH FFRQFRQYHD TTPHAWRKMQ RQVATS
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