Gene Ava_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1123 
Symbol 
ID3683514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1371341 
End bp1372288 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content48% 
IMG OID637716459 
Productglycosyl transferase family protein 
Protein accessionYP_321642 
Protein GI75907346 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0764134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA CAGTTATTGT GCCTACTTAC CGCCGTACCA AAGACCTAAC ACGCTGCTTG 
GAGTCATTAG AAAAGCAATC TCGACCAGCT GATGAGGTAT TGGTGGTAGT TCGAGATACT
GATGTGGAGA CTTGGCAATT TCTGGAAACC ATCGCGCCCC ATTCTCTACC ATTACACACA
ACAACAGTGC GTGTTCCTGG TGTAGTCGCG GCGATGAATG CAGGACTAGA TATAGCTCAA
GGAGATATCA TCGCCTTTAC AGATGATGAT GCAGCGCCCC ATAGTAATTG GTTAGCACAA
ATTGAAACCC ATTTTCTCGC CCATGAACAA GTTGCCGGTG TTGGTGGACG AGATTGGGTA
TATCATGGCG ATCGCCTAGA AGATGGTACT TGCCCAGTAG TTGGTCAGGT TCATTGGTTT
GGCAGAGTGA TTGGTAATCA CCATATAGGT ATCGGAAAAG CCCGCGAGGT GGATGTTCTC
AAGGGAGTTA ACATGAGCTT TCGGCGATCG GCTGTCCACG GATTACGTTT TGATCAACGG
ATGCTGGGTA CAGGCGCACA GGTTCACTTC GAGGTCGCCT TTTGTCTAGC CTTAAAGCGG
GCTGGTTGGA AGCTTATCTA TGACCCCCAA ATCGGAGTCA ACCATTATCC AGCCCAGCGA
TTTGACGAAG ACCAGCGCCA AAGCTTCAAT CATCTGGCTG TAACTAATGC CGTCCACAAC
GAAACATTAG CCTTATTAGA ACACCTATCA CCAACTCAAC AATTAACATT TCTGCTCTGG
GCGACCTTGG TGGGTACGAG AGACGCTATG GGTTTGATGC AATTTTTCCG CTTTTTACCG
AGCGATCGCC TATTAGCTGG ACAGAAGTTA TTAGCAGCTT GGCATGGTCG CTGGCGCGGT
TGGCGAACCT GGCAAAGTTC AATTCGCTTT GCCCAAATTA AAAATTAA
 
Protein sequence
MKITVIVPTY RRTKDLTRCL ESLEKQSRPA DEVLVVVRDT DVETWQFLET IAPHSLPLHT 
TTVRVPGVVA AMNAGLDIAQ GDIIAFTDDD AAPHSNWLAQ IETHFLAHEQ VAGVGGRDWV
YHGDRLEDGT CPVVGQVHWF GRVIGNHHIG IGKAREVDVL KGVNMSFRRS AVHGLRFDQR
MLGTGAQVHF EVAFCLALKR AGWKLIYDPQ IGVNHYPAQR FDEDQRQSFN HLAVTNAVHN
ETLALLEHLS PTQQLTFLLW ATLVGTRDAM GLMQFFRFLP SDRLLAGQKL LAAWHGRWRG
WRTWQSSIRF AQIKN