Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1123 |
Symbol | |
ID | 3683514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1371341 |
End bp | 1372288 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637716459 |
Product | glycosyl transferase family protein |
Protein accession | YP_321642 |
Protein GI | 75907346 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0764134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA CAGTTATTGT GCCTACTTAC CGCCGTACCA AAGACCTAAC ACGCTGCTTG GAGTCATTAG AAAAGCAATC TCGACCAGCT GATGAGGTAT TGGTGGTAGT TCGAGATACT GATGTGGAGA CTTGGCAATT TCTGGAAACC ATCGCGCCCC ATTCTCTACC ATTACACACA ACAACAGTGC GTGTTCCTGG TGTAGTCGCG GCGATGAATG CAGGACTAGA TATAGCTCAA GGAGATATCA TCGCCTTTAC AGATGATGAT GCAGCGCCCC ATAGTAATTG GTTAGCACAA ATTGAAACCC ATTTTCTCGC CCATGAACAA GTTGCCGGTG TTGGTGGACG AGATTGGGTA TATCATGGCG ATCGCCTAGA AGATGGTACT TGCCCAGTAG TTGGTCAGGT TCATTGGTTT GGCAGAGTGA TTGGTAATCA CCATATAGGT ATCGGAAAAG CCCGCGAGGT GGATGTTCTC AAGGGAGTTA ACATGAGCTT TCGGCGATCG GCTGTCCACG GATTACGTTT TGATCAACGG ATGCTGGGTA CAGGCGCACA GGTTCACTTC GAGGTCGCCT TTTGTCTAGC CTTAAAGCGG GCTGGTTGGA AGCTTATCTA TGACCCCCAA ATCGGAGTCA ACCATTATCC AGCCCAGCGA TTTGACGAAG ACCAGCGCCA AAGCTTCAAT CATCTGGCTG TAACTAATGC CGTCCACAAC GAAACATTAG CCTTATTAGA ACACCTATCA CCAACTCAAC AATTAACATT TCTGCTCTGG GCGACCTTGG TGGGTACGAG AGACGCTATG GGTTTGATGC AATTTTTCCG CTTTTTACCG AGCGATCGCC TATTAGCTGG ACAGAAGTTA TTAGCAGCTT GGCATGGTCG CTGGCGCGGT TGGCGAACCT GGCAAAGTTC AATTCGCTTT GCCCAAATTA AAAATTAA
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Protein sequence | MKITVIVPTY RRTKDLTRCL ESLEKQSRPA DEVLVVVRDT DVETWQFLET IAPHSLPLHT TTVRVPGVVA AMNAGLDIAQ GDIIAFTDDD AAPHSNWLAQ IETHFLAHEQ VAGVGGRDWV YHGDRLEDGT CPVVGQVHWF GRVIGNHHIG IGKAREVDVL KGVNMSFRRS AVHGLRFDQR MLGTGAQVHF EVAFCLALKR AGWKLIYDPQ IGVNHYPAQR FDEDQRQSFN HLAVTNAVHN ETLALLEHLS PTQQLTFLLW ATLVGTRDAM GLMQFFRFLP SDRLLAGQKL LAAWHGRWRG WRTWQSSIRF AQIKN
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