| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1120 |
|---|
| Symbol | |
|---|
| ID | 3683511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1367861 |
|---|
| End bp | 1368835 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637716456 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_321639 |
|---|
| Protein GI | 75907343 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0838715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATAG ATACTAACTC CTCCACTCCT TTAGTTAGCG TTATTACACC TACCTATAAC
CGCCCAAACT ATTTACAAGC AGCGCTGACA AGTGCCGTAA GACAGACTTA TTCCCATATT
GAAATTATTG TTTGCGACAA TTGTAGTCCA CAAAATCCCC AGGCAATTGT TGATTCCTTT
GATGATTCGC GTATTCGCTT TTTCCGCAAT TCATCAAATA TGGGAATGTT TGCCAACACC
ATGAAAGCCT TTCAAATGGC GCGGGGAAAA TATATTGCCT GTTTGCTGGA CGATGATATG
TGGGAAGAGG ACTTTCTCGA AAAGCTCGTT CCGCCTTTGG AAGCTAACCC CAATTTAGCC
TTAGCCTTTT GTGACCACTA CATCATAGAT GCCGACGGCA ATATAGATGA TGCGCTCACA
GAAGAATATT CCCATACATA TAAACGAGTT GATTTGCCAG AAGGAATTTA TCAACCCTTT
TATCGGATGG CCTTAATAGA TAGATCAGTC TCGACAGCCA CAGCAGCCGT GATGCGTCGA
GATGCGATCG CCTGGGATGC CATTCCGGCT GAAGTCGGCG GTTCATGGGA TATATATTTA
AACTACCTGT TTTGTCGTTC TGGCTTAGGA GCTTATTTTT ATCCGGAAAA ACTGACACGT
TATCGTGTCC ATGAACAAAC AGAAACCATG CTCAGTGGTA AGCGCGATCC TCAGGCAAAA
ATCCGCAAGG CTCAAGCTGA TATGTTTTGC TACGAGCAGT TTATGGCTGA TGAGCGCCTA
CAGGAGCTTA AACCCTATTT TCAGCAGCAA TGGGCCCATG TCAACACAAC CTTAGGCATT
GGTTTCATGC GTAGTAAACA GATGAAATTA GCCCGTTCCT ACTTCTGGCG TTCTTTAAAA
CAAAGTCTAA AGCTGAGAAC GATGGTGGGG TTGATGCTCA GTTTTACACC CCCGACGATC
GCATCAAGAT TTTAA
|
|---|
| Protein sequence | MAIDTNSSTP LVSVITPTYN RPNYLQAALT SAVRQTYSHI EIIVCDNCSP QNPQAIVDSF
DDSRIRFFRN SSNMGMFANT MKAFQMARGK YIACLLDDDM WEEDFLEKLV PPLEANPNLA
LAFCDHYIID ADGNIDDALT EEYSHTYKRV DLPEGIYQPF YRMALIDRSV STATAAVMRR
DAIAWDAIPA EVGGSWDIYL NYLFCRSGLG AYFYPEKLTR YRVHEQTETM LSGKRDPQAK
IRKAQADMFC YEQFMADERL QELKPYFQQQ WAHVNTTLGI GFMRSKQMKL ARSYFWRSLK
QSLKLRTMVG LMLSFTPPTI ASRF
|
|---|
| |