Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1024 |
Symbol | |
ID | 3678692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1239535 |
End bp | 1240401 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716360 |
Product | nitrate transport ATP-binding subunits C and D |
Protein accession | YP_321543 |
Protein GI | 75907247 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0928841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACC GTAGTTCAAG CGTTACCGAA ACCACCAGAA GCAGACAGGA AAGACACTCG GTTAGTGCGA CTAACAACAG ACCTTTCCTA GAAATTAAAG ACGTTAGTAA AGTCTATCCC ACCAAGAAAG GCCCCTTCAC CGTCCTTGAT GGCGTTAACT TAAATGTAGA ACAGGGTGAA TTTCTCTGTG TTATTGGTCA CTCTGGTTGT GGTAAATCCA CACTACTAAA TATGGTGTCT GGTTTTAACT TTCCTACCTC CGGGCAAGTT TTACTGGAAG GTCAACCCAT CACCCAACCT GGCCCCGATA GAATGGTGGT GTTTCAAAAC TATGCCCTCC TTCCTTGGCG GACTGCTTTT GAAAATATCT ATCTAGCGGT GAATGCTGTT TACCCCAACA AGCCAGAACC AGAGAAAAGG GCAATTGTCC GGGAACATTT GGCAATGGTG GGACTGGCTG ATGCGATGGA GAAAAAACCC ATGCAAATGT CAGGGGGTAT GAGACAACGG GTATCTATTG CCCGTGCTTT GGCAATTCGT CCCAAAGTCC TGATTTTAGA CGAACCTTTT GGGGCGCTAG ATGCCATCAC CAAAGAGGAA TTACAAGAAG AATTGTTGAA AATCTGGGGT GATAATCGCT GCACAGTATT GATGATTACC CACGACATCG ATGAGGCGCT ATTTTTAGCC GACAAATTGG TAATGATGAC CAACGGCCCC CACGCCAAAA TCGGTGAAGT GTTGGAAATT CCATTTTCTC GCCCACGCGA TCGCGCCCGT ATAATGGAAG ATCCAGAATA CTATAAACTG CGTAACTACG CCCTAGACTT TCTCTTTAAT AGATTTGCCC ATGATGATGT GGGATAA
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Protein sequence | MQNRSSSVTE TTRSRQERHS VSATNNRPFL EIKDVSKVYP TKKGPFTVLD GVNLNVEQGE FLCVIGHSGC GKSTLLNMVS GFNFPTSGQV LLEGQPITQP GPDRMVVFQN YALLPWRTAF ENIYLAVNAV YPNKPEPEKR AIVREHLAMV GLADAMEKKP MQMSGGMRQR VSIARALAIR PKVLILDEPF GALDAITKEE LQEELLKIWG DNRCTVLMIT HDIDEALFLA DKLVMMTNGP HAKIGEVLEI PFSRPRDRAR IMEDPEYYKL RNYALDFLFN RFAHDDVG
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