| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1021 |
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| Symbol | |
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| ID | 3678689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1230959 |
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| End bp | 1234288 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637716357 |
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| Product | histidine kinase |
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| Protein accession | YP_321540 |
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| Protein GI | 75907244 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.103758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCC AAAGCCTTAT GTCAATGCTA CAGTATCCGC TTGATGAATT TCTAGCCAAT
GTAACCAGTT GCTTAGAAAC AAGTACTCTG GCAATGGTGC TGGAGGTTTT TGAGCAACAG
CAATGCGATC GCCTACCGCC CGCCTTTGGC GATCGCTTGG TGATAGTAAA TGAGCAGCAA
TGCCCCGTTG GGTTGCTGCA CTCTGGCCAG CTAGCACGGA AGTTGTTAGC AGCCACAGGT
AATGAACTAT TTTTAAACTT ACAACAGCCA CTGTCAACCT TTAGTCAAGC CTTAATTGAA
CCAATACAGA TATTACCAGC CAGCCATAGT GTAGAGCAAT TAGGCGTATT TTGGCGGTAT
CACCAAGCCC ATAACTGGGA ATATGTACTG GTTGATGAAG AAGGTAAATT CTTGGGGATT
CTCGACAGTG TACGTTTATT GGCAGCATTG GCAAAAGAGC AAACAGCGAA TCATTCTCAT
GCCCCTAACT CTACATATGC CCCTAACTCT ACATATATAG ATGGTGTCGA GGCTGATTTG
AGGGGATCAC CTATGGAGAG TGGAACGCCG ACGCTACATT CATTGCAGGA TGTCGCCCGT
TCTCTGCGAG ATACTTCACC AGCGTCTAGA GGTGACCAAC TCCAACCATT GGTACAGTTA
TTAGAGCGTC TACCTTGGCC TCTCATGTTG CAAACCAGTG CAGGTGAAGT GTTAACACGA
AATTTAGCTT GGTGGCAACA ATTGGGAGCG TTGAAAGATC CAGAGGGTGT GCGTCAACAA
GTGGAAGCCA TTTTGGCAGC TACCAGGATT AAACAGCCAG AATATGTTGG TCAAAGAAGT
ACCACAGGTA CAAATCATAT TCAAGGCTAT GAGCAAGTAG GAGAGGAGTT AGCCCAAATA
CCAGCCACAG GTTTGCTACC CCTGTCACCC TACGAACCAA CAACCAGCGC CAAAACTAGC
TCTAGTCGCT GCTTTTTAGA TAGTCAAATG GGTACTTGTA CCTGTGTGGT AGAAGTGCAG
AACGGACAGG AGCGAGTTTG GCAGTTTGCC AAAATTCTGT TAGACAATAC CGATTTAAAA
TTGCCCAACA CCGATGATTT ATGGCTGGTG TTGGCGACGG ATGTCACAGA ACAGCAGCAA
CTTTGTAAAG AACTTGCAGC TAAAAATGCT GATCTCATTC AGTTAAATCG CTTAAAAGAT
GAATTTTTAG CTTGTATTAG TCATGAGTTG AAAACACCCT TAACGGCAGT TTTAGGCTTA
TCGCGGTTGC TAGTAGACCA GCAGTTGGGG GAACTGAACG AACGCCAAGC CCGTTATGCG
GGGCTAATTC ACCAAAGTGG TCGCCACCTG ATGAGCGTGG TAAATGACAT TTTGGATTTA
ACTCGCATGG AAACAGGGCA AATGGAATTG ACCCCAGTAC CAGTGAGTAT TCGGGCTGTG
TGCGATCGCG CCCTTTCTGA AGCCAAAGCG ATCCATAATC AAACTAGTAA AGGCAGCACC
ACAGAAGCCA CTCGCCAATC TACGCCAGAA TTTACACTTT CCATTGAACT GGACTTAGAC
CAGATAGTGG CTGATGAACT GCGTCTGCGG CAAATGCTAG TTCACCTGCT GTCTAACGCT
TTCAAATTTA CAGAAATATC CGGGGAAATT GGCTTAAGAG TCAGTCACTG GGAAGGATGG
ATTGCCTTTA CAGTTTGGGA TACAGGGATT GGTATTCCCG AACACCAACA ACATTTAATT
TTTCAAAAGT TCCAACAATT AGAAAATCCT CTGACTCGCC AATTTGAAGG TACAGGCTTA
GGACTAGTCT TAACTAGGGC TTTAGCTCGT CTCCACGGCG GTGATGTCAG CTTTTTGTCG
CGGGAAGGTA AAGGCAGTCA ATTTACCTTG TTGTTACCAC CTAGCCCACC CAGCAGTGGT
TTTTCTGAGT CGGAAGTGGA AGTAGAAGAT ATGCCCACCT CCAACACCCG CAATCGGGTA
ACTAATACTG GACAAAATCA TCCAGTTTCC TGTCAAAGAT TAGTCCTAGT GGTGGAAGCT
GTAGCCCGAT ATATAGAAGA TTTAACCGAC CAACTGAAAA CTTTAGGCTA TCGAGTAGTA
ATTGCTCGTT CAGGAACAGA AGCTGTCGAA AAAGCCAGGC GTTTACAACC AAAAGCCATC
TTTTTAAATC CCCTGTTACC TTTGCTGTCT GGTTGGGATG TGCTGACTCT GCTGAAATCT
GATAGCGCAA CTCGTCATAT TCCGGTAGTT GTGACCGCTA CAGGGGCAGA AAAAGAAATA
GCCTTTGCTA ACCGCGCCGA TGGTTTCCTC AGCTTGCCAG TAGAACAGCA ATCCCTGACA
CCATTGTTAG ATAAATTATG TGGCAAATCG ACGGTGCAGT CACTAGGTTT AGGGATTAAC
GAAAGGAATC AATCAAAAAA GACTCTACGG ATTCTGCGGT TAGTGGATGT GGAACTGGAG
TCTATCAATC CCCATCCTTC ACTACAAGAA CACCGGGTGA TTGAAGTGGA TGATTTAGAC
CAAGCCGAAC TTTTAGCCAG GGTTTGGCAG TTTGATGTCA TTCTGTTGGA TGTAGAAACT
TCTCTAGCCA AAGCTTATTT ACAACAGTTA ACTCAGCATC CCCGCCTAGC CGCTTTACCT
TTAGTCACTT GTGACGTGGA AACAACCTTG GCTGCTTCCC AAATCCCTGG TCTTTCGGTG
TTTCCTTGTT TAACACCCCG TGTGAAAGAT CAGGACAGCG AACTACGCAA AGGTAAAGTC
GATCCCTTAC TATCGGTGTT ACAAATTGCC TCCGGTATCT GCTACCCACC AAGTATCTTT
GTAGTAGACT TGACCATGTT AGAGGATTTA CCACAAGCTA GACGCAAGCC AGTCAAGGGT
TCTGGTACAG AGAGAAGAAC TGTCAGCCGT GGAGAAGTTG CAGAACGGGG AACTGAATGG
TTCCAAGCTT TAATTCAGTA CTTACAAACA GCTGGCTTGA AAGCCACAAT GGCGCGCTGT
TGGGCAGAAG TTTTACAACA AATTGGCCAT AATAGCGTCG ATTTACTGCT GATTTGTCTA
GGAGAATCAG CTATCCATCC AGAAGCCGTC AATGCTTTGA AAGCATTACA GGATTTACCC
TGTAATTTGC CACCGATTTT AGTTATTGAC CAACAATTAA GTCGCACTCA AGTTACTTCT
CGCAGTAGAC TGACTCATCA TAAAAAGCAG GAGTCAGAAT CCATCACAGA TGTGGCAAAA
GCGATCGCTA CCCAAATTGT CCCACGTTCC ATCTCAATGG AAGACCTGTT AACTCAAATT
CATCAAACTT TGACTCTCAA TGAACGCTAA
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| Protein sequence | MIPQSLMSML QYPLDEFLAN VTSCLETSTL AMVLEVFEQQ QCDRLPPAFG DRLVIVNEQQ
CPVGLLHSGQ LARKLLAATG NELFLNLQQP LSTFSQALIE PIQILPASHS VEQLGVFWRY
HQAHNWEYVL VDEEGKFLGI LDSVRLLAAL AKEQTANHSH APNSTYAPNS TYIDGVEADL
RGSPMESGTP TLHSLQDVAR SLRDTSPASR GDQLQPLVQL LERLPWPLML QTSAGEVLTR
NLAWWQQLGA LKDPEGVRQQ VEAILAATRI KQPEYVGQRS TTGTNHIQGY EQVGEELAQI
PATGLLPLSP YEPTTSAKTS SSRCFLDSQM GTCTCVVEVQ NGQERVWQFA KILLDNTDLK
LPNTDDLWLV LATDVTEQQQ LCKELAAKNA DLIQLNRLKD EFLACISHEL KTPLTAVLGL
SRLLVDQQLG ELNERQARYA GLIHQSGRHL MSVVNDILDL TRMETGQMEL TPVPVSIRAV
CDRALSEAKA IHNQTSKGST TEATRQSTPE FTLSIELDLD QIVADELRLR QMLVHLLSNA
FKFTEISGEI GLRVSHWEGW IAFTVWDTGI GIPEHQQHLI FQKFQQLENP LTRQFEGTGL
GLVLTRALAR LHGGDVSFLS REGKGSQFTL LLPPSPPSSG FSESEVEVED MPTSNTRNRV
TNTGQNHPVS CQRLVLVVEA VARYIEDLTD QLKTLGYRVV IARSGTEAVE KARRLQPKAI
FLNPLLPLLS GWDVLTLLKS DSATRHIPVV VTATGAEKEI AFANRADGFL SLPVEQQSLT
PLLDKLCGKS TVQSLGLGIN ERNQSKKTLR ILRLVDVELE SINPHPSLQE HRVIEVDDLD
QAELLARVWQ FDVILLDVET SLAKAYLQQL TQHPRLAALP LVTCDVETTL AASQIPGLSV
FPCLTPRVKD QDSELRKGKV DPLLSVLQIA SGICYPPSIF VVDLTMLEDL PQARRKPVKG
SGTERRTVSR GEVAERGTEW FQALIQYLQT AGLKATMARC WAEVLQQIGH NSVDLLLICL
GESAIHPEAV NALKALQDLP CNLPPILVID QQLSRTQVTS RSRLTHHKKQ ESESITDVAK
AIATQIVPRS ISMEDLLTQI HQTLTLNER
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