| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0979 |
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| Symbol | |
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| ID | 3680242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1179644 |
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| End bp | 1180243 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637716313 |
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| Product | tRNA--hydroxylase |
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| Protein accession | YP_321498 |
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| Protein GI | 75907202 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000176694 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTTACCC CCGTGTTATC AACAATCAAT GTACTAAAGC AAACTACCAG TGAGGCTTGG
ATAGAACAAG CGATCGCTAA CTTAGATATC ATATTGCTTG ACCACTCCCA CTGCGAACGC
AAAGCGGCGG GTGTGGCGTT AAATTTTATG TTTCGCTACC CATCCAATAC CAAAATGGTA
AGGGAATTAA CAGCGATCGC CCGTGAAGAA CTAGAACATT TTGAACTGGT AAATCAGTGG
CTAGAACGTC GCAATATACC CCTAGCACCC CTACCCCCGC CTCCCTATGG CGCTGGCTTA
AAAGCTGCTG CGCGTACCAA CGAACCAGAA CGCTTTTTAG ATTCCTTACT TGTGACTGGT
TTAATCGAAG CACGAAGTCA CGAACGCTTA GGCTTATTAG CGATACACTG TCCCGAACCA
GAACTAGCCA AGTTTTATAA AGGTTTGATG GCCTCAGAGG CGCGACACTT TGGTACATAT
TGGGTTTTAG CGGCTACTTA CTTTGACCGG GAAATTGTTA GTCAAAGGCT CGATGAATTA
GCTATTGTTG AAAGTGAGTT ACTAGAAAAT TTACACCCAG AACCGAGAAT TCATAGTTAG
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| Protein sequence | MLTPVLSTIN VLKQTTSEAW IEQAIANLDI ILLDHSHCER KAAGVALNFM FRYPSNTKMV
RELTAIAREE LEHFELVNQW LERRNIPLAP LPPPPYGAGL KAAARTNEPE RFLDSLLVTG
LIEARSHERL GLLAIHCPEP ELAKFYKGLM ASEARHFGTY WVLAATYFDR EIVSQRLDEL
AIVESELLEN LHPEPRIHS
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