Gene Ava_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0974 
Symbol 
ID3680237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1176746 
End bp1177057 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content48% 
IMG OID637716308 
ProductRNA-binding region RNP-1 
Protein accessionYP_321493 
Protein GI75907197 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.02422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTT ATGTTGGCAA TCTTTCTTAC GACGTTACAG AAGAAAGCTT GAACGCTGTA 
TTTGCAGAAT ATGGTTCTGT AAAGCGGGTT CAGCTACCTG TAGACCGTGA AACCGGCCGT
GTACGCGGCT TTGGATTCGT GGAAATGGGC AGTGATGCGG AAGAAACAGC AGCAATCGAA
GCACTTGACG GTGCTGAGTG GATGGGACGC GACCTTAAAG TAAATAAGGC GAAACCCAGA
GAAGACAGAG GCGGTTCTAG GGGTTCCTTT GGCGGCAATC GCAGCAACAA CAACTTCCGT
AACCGTTATT AA
 
Protein sequence
MSIYVGNLSY DVTEESLNAV FAEYGSVKRV QLPVDRETGR VRGFGFVEMG SDAEETAAIE 
ALDGAEWMGR DLKVNKAKPR EDRGGSRGSF GGNRSNNNFR NRY