Gene Ava_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0872 
Symbol 
ID3681734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1066445 
End bp1067395 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content46% 
IMG OID637716206 
Producthypothetical protein 
Protein accessionYP_321391 
Protein GI75907095 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0354264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0675112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA AGAGCAAGCC AGACTGGGCT GGTGAAAGTT TACTCTCCAA TTTCGTGAAT 
TTGTTGATTC AAACTAAACC CATTTACGGG GTAATGAAAC AACAGGCTAG ACAAGTCCTC
ATCAAAACGG CCGAAAAAAA CGGTATTCCC TGGCGTAAGA ACTACGAAGC ACTCCAAGCA
TCACCTGCAA AAAAACTGCT GGCGGCGGTG ACGAACCCTC ATGTGATTTA TCCCGACTAC
TATAAAGTAC CCTTTCACGC TTACACAGAA GGTAATTTAT GCTGGGACGC TGCTTTTGAA
ACTGAATCAG CTACCTATGC AATGGCGTTG CGGGTATGGC CGCAAGAAAA CCTCACTTGG
GAAGCCGCTC ATGATAGGCT CAGAGGCACT TTTCATGACG CTTTAGAAAC ATACGCTCCC
CAGCAAGTCA GAGATATTTT AGATATTGGT TGCTCAGTGG GTATTTCTAC TTTGGCGCTG
CATCGTTATT ACCAACGCCG GGAGAGGTAT CCAGTCAGGA CTGTGGGTTT GGATTTATCT
CCCTATATGC TAGCTGTAGC TAAAACTAGG GATGTTAATA GTGAAATATC CGAATGGCTT
CATGCTAGAG CCGAAAACAC AGGCTTAAGC GATAAATCTT TTGATTTGGT TACTATCCAG
TTTGTTACCC ATGAACTTCC TAGCTACGTC AGTCAGGAAA TTTTCGCCGA AGCCAAACGG
TTATTACGTC CTGGTGGTTA TATTGCTTTA GTTGATAATA ACCCGCGATC GCCTGTCATC
CAAAATCTTC CCCCTGTCCT CTTCACCCTC ATGAAAAGCA CTGAGCCGTG GAGTGATGAC
TACTACACCT TTGACATCGA AGCCGCGCTA CAAGCCGTAG GTTTTGCACC ACCAGTCACC
GTCCCCAGTG ACCCTAGACA CCGGACGATT ATTGCGAGGA AACCAATTTA A
 
Protein sequence
MDNKSKPDWA GESLLSNFVN LLIQTKPIYG VMKQQARQVL IKTAEKNGIP WRKNYEALQA 
SPAKKLLAAV TNPHVIYPDY YKVPFHAYTE GNLCWDAAFE TESATYAMAL RVWPQENLTW
EAAHDRLRGT FHDALETYAP QQVRDILDIG CSVGISTLAL HRYYQRRERY PVRTVGLDLS
PYMLAVAKTR DVNSEISEWL HARAENTGLS DKSFDLVTIQ FVTHELPSYV SQEIFAEAKR
LLRPGGYIAL VDNNPRSPVI QNLPPVLFTL MKSTEPWSDD YYTFDIEAAL QAVGFAPPVT
VPSDPRHRTI IARKPI